Cow genome map
Conread name: | Ss1.1-Pig3-SRG8021B14.5 |
Conread position: | 536-669 |
Cow position: | chr9:26477000-26477134 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 105 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 547-670 |
Cow position: | chr9:44526906-44527033 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 101 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 547-708 |
Cow position: | chr9:34410595-34410427 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 126 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 35, 68 |
Conread position: | 547-708 |
Cow position: | chr9:35028372-35028196 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 137 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 549-664 |
Cow position: | chr9:37016492-37016376 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 94 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 42, 11 |
Conread position: | 549-669 |
Cow position: | chr9:8613411-8613292 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 96 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 549-700 |
Cow position: | chr9:48016791-48016941 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 114 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 111, 0 |
Conread position: | 550-669 |
Cow position: | chr9:31625933-31626053 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 96 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 552-660 |
Cow position: | chr9:27279110-27279219 (view UCSC Genome Browser custom track) |
Alignm length: | 110 |
Alignm identity: | 88 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 552-669 |
Cow position: | chr9:28315227-28315347 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 98 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 552-669 |
Cow position: | chr9:50977450-50977334 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 94 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 552-708 |
Cow position: | chr9:35295501-35295659 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 126 |
Alignm E-value: | 8e-27 |
Alignm gaps (pig, cow): | 102, 26 |
Conread position: | 552-708 |
Cow position: | chr9:54681329-54681478 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 119 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 553-659 |
Cow position: | chr9:53413471-53413367 (view UCSC Genome Browser custom track) |
Alignm length: | 107 |
Alignm identity: | 88 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 553-697 |
Cow position: | chr9:39148888-39149037 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 112 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 101, 0 |
Conread position: | 553-701 |
Cow position: | chr9:45170582-45170419 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 126 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 554-650 |
Cow position: | chr9:19743784-19743878 (view UCSC Genome Browser custom track) |
Alignm length: | 97 |
Alignm identity: | 82 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 555-657 |
Cow position: | chr9:36849435-36849539 (view UCSC Genome Browser custom track) |
Alignm length: | 105 |
Alignm identity: | 86 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 555-660 |
Cow position: | chr9:6954446-6954340 (view UCSC Genome Browser custom track) |
Alignm length: | 107 |
Alignm identity: | 87 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 555-668 |
Cow position: | chr9:34286606-34286719 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 92 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 555-668 |
Cow position: | chr9:48046340-48046456 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 93 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 555-669 |
Cow position: | chr9:41644944-41644831 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 92 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 555-701 |
Cow position: | chr9:7805592-7805743 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 113 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 111, 0 |
Conread position: | 555-708 |
Cow position: | chr9:4629917-4630073 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 115 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 99, 0 |
Conread position: | 555-708 |
Cow position: | chr9:9091306-9091136 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 135 |
Alignm E-value: | 8e-27 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 556-659 |
Cow position: | chr9:32662229-32662124 (view UCSC Genome Browser custom track) |
Alignm length: | 106 |
Alignm identity: | 87 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 556-708 |
Cow position: | chr9:19657167-19657007 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 126 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 26, 54 |
Conread position: | 556-708 |
Cow position: | chr9:48808951-48809107 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 125 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 18, 82 |
Conread position: | 558-659 |
Cow position: | chr9:34390225-34390327 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 85 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 559-659 |
Cow position: | chr9:28747707-28747606 (view UCSC Genome Browser custom track) |
Alignm length: | 102 |
Alignm identity: | 88 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 559-669 |
Cow position: | chr9:34423429-34423540 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 91 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 559-669 |
Cow position: | chr9:36457809-36457918 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 93 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 104, 19 |
Conread position: | 560-670 |
Cow position: | chr9:8066226-8066116 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 90 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 52, 98 |
Conread position: | 561-708 |
Cow position: | chr9:7543444-7543294 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 116 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 21, 48 |
Conread position: | 561-708 |
Cow position: | chr9:8645078-8645235 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 126 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 100, 34 |
Conread position: | 561-708 |
Cow position: | chr9:51891065-51891215 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 113 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 88, 0 |
Conread position: | 561-708 |
Cow position: | chr9:61019553-61019393 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 126 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 562-648 |
Cow position: | chr9:11886332-11886419 (view UCSC Genome Browser custom track) |
Alignm length: | 88 |
Alignm identity: | 77 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 562-660 |
Cow position: | chr9:28866280-28866180 (view UCSC Genome Browser custom track) |
Alignm length: | 101 |
Alignm identity: | 84 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 562-668 |
Cow position: | chr9:5399276-5399383 (view UCSC Genome Browser custom track) |
Alignm length: | 108 |
Alignm identity: | 90 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 562-708 |
Cow position: | chr9:59586130-59586280 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 116 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 92, 0 |
Conread position: | 563-660 |
Cow position: | chr9:26578394-26578295 (view UCSC Genome Browser custom track) |
Alignm length: | 100 |
Alignm identity: | 84 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 563-669 |
Cow position: | chr9:9724061-9723957 (view UCSC Genome Browser custom track) |
Alignm length: | 107 |
Alignm identity: | 90 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 563-669 |
Cow position: | chr9:52510929-52511037 (view UCSC Genome Browser custom track) |
Alignm length: | 109 |
Alignm identity: | 91 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 563-708 |
Cow position: | chr9:3946328-3946179 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 115 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 103, 19 |
Conread position: | 563-708 |
Cow position: | chr9:34917361-34917216 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 111 |
Alignm E-value: | 8e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 563-708 |
Cow position: | chr9:51566683-51566526 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 120 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 564-669 |
Cow position: | chr9:8537122-8537228 (view UCSC Genome Browser custom track) |
Alignm length: | 107 |
Alignm identity: | 89 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 565-657 |
Cow position: | chr9:30653240-30653147 (view UCSC Genome Browser custom track) |
Alignm length: | 94 |
Alignm identity: | 81 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 565-669 |
Cow position: | chr9:5068655-5068759 (view UCSC Genome Browser custom track) |
Alignm length: | 105 |
Alignm identity: | 88 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 567-699 |
Cow position: | chr9:11123661-11123523 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 109 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 567-708 |
Cow position: | chr9:14738070-14738218 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 115 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 569-708 |
Cow position: | chr9:2397632-2397776 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 111 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 99, 89 |
Conread position: | 569-708 |
Cow position: | chr9:63785085-63784945 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 109 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 85, 13 |
Conread position: | 570-701 |
Cow position: | chr9:8767592-8767455 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 106 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 572-706 |
Cow position: | chr9:17769145-17769285 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 110 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 573-669 |
Cow position: | chr9:31514107-31514013 (view UCSC Genome Browser custom track) |
Alignm length: | 97 |
Alignm identity: | 82 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 578-659 |
Cow position: | chr9:39681132-39681213 (view UCSC Genome Browser custom track) |
Alignm length: | 82 |
Alignm identity: | 73 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 580-708 |
Cow position: | chr9:16216811-16216948 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 107 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 80, 0 |
Conread position: | 580-708 |
Cow position: | chr9:44822489-44822355 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 108 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 71, 0 |
Show alignments to all cow chromosomes.