Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8021B14.5
        

               Conread position:
               517-708
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               6, 65
               

               Conread position:
               542-669
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               542-707
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               10, 38
               

               Conread position:
               545-701
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               12, 66
               

               Conread position:
               547-701
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               111, 14
               

               Conread position:
               548-669
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               106, 7
               

               Conread position:
               548-670
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               97
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               34, 57
               

               Conread position:
               548-700
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               117, 34
               

               Conread position:
               548-708
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               549-669
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               549-676
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               549-700
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               120, 10
               

               Conread position:
               550-657
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               550-708
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               104, 28
               

               Conread position:
               552-669
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               552-669
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               93
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               552-669
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               97
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               552-699
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               553-669
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               553-669
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               46, 23
               

               Conread position:
               553-700
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               111, 91
               

               Conread position:
               553-708
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               31, 108
               

               Conread position:
               554-700
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               112, 41
               

               Conread position:
               555-659
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               93
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               555-659
               

               Cow position:
               
               

               Alignm length:
               105
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               555-659
               

               Cow position:
               
               

               Alignm length:
               107
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               555-660
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               555-660
               

               Cow position:
               
               

               Alignm length:
               107
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               555-669
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               17, 61
               

               Conread position:
               555-669
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               555-669
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               91
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               555-669
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               555-693
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               101, 120
               

               Conread position:
               555-701
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               24, 56
               

               Conread position:
               555-708
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               24, 160
               

               Conread position:
               555-708
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               82, 52
               

               Conread position:
               555-708
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               29, 106
               

               Conread position:
               555-708
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               98, 23
               

               Conread position:
               556-663
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               87
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               556-668
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               92
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               556-669
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               556-669
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               556-669
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               556-669
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               557-659
               

               Cow position:
               
               

               Alignm length:
               105
               

               Alignm identity:
               89
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               557-669
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               557-670
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               558-652
               

               Cow position:
               
               

               Alignm length:
               95
               

               Alignm identity:
               81
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               558-669
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               558-669
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               96
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               558-669
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               94
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               558-701
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               558-706
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               112
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               24, 122
               

               Conread position:
               559-667
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               12, 104
               

               Conread position:
               559-708
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               559-708
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               16, 56
               

               Conread position:
               560-700
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               560-701
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               561-669
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               90
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               561-697
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               561-708
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               562-669
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               89
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               562-669
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               87
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               562-669
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               562-708
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               94, 20
               

               Conread position:
               563-661
               

               Cow position:
               
               

               Alignm length:
               100
               

               Alignm identity:
               86
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               563-669
               

               Cow position:
               
               

               Alignm length:
               107
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               563-669
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               88
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               563-701
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               563-701
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               563-708
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               564-650
               

               Cow position:
               
               

               Alignm length:
               89
               

               Alignm identity:
               79
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               564-669
               

               Cow position:
               
               

               Alignm length:
               106
               

               Alignm identity:
               89
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               564-669
               

               Cow position:
               
               

               Alignm length:
               106
               

               Alignm identity:
               88
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               564-669
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               564-708
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               565-661
               

               Cow position:
               
               

               Alignm length:
               97
               

               Alignm identity:
               80
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               565-669
               

               Cow position:
               
               

               Alignm length:
               107
               

               Alignm identity:
               87
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               565-708
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               566-669
               

               Cow position:
               
               

               Alignm length:
               104
               

               Alignm identity:
               85
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               566-669
               

               Cow position:
               
               

               Alignm length:
               104
               

               Alignm identity:
               86
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               566-684
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               99
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               84, 65
               

               Conread position:
               566-700
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               567-669
               

               Cow position:
               
               

               Alignm length:
               104
               

               Alignm identity:
               88
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               567-700
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               79, 18
               

               Conread position:
               568-700
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               15, 57
               

               Conread position:
               568-708
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               569-685
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               569-708
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               13, 89
               

               Conread position:
               571-659
               

               Cow position:
               
               

               Alignm length:
               89
               

               Alignm identity:
               76
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               571-700
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               571-701
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               572-700
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               574-663
               

               Cow position:
               
               

               Alignm length:
               91
               

               Alignm identity:
               78
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               574-699
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               576-669
               

               Cow position:
               
               

               Alignm length:
               94
               

               Alignm identity:
               82
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               576-700
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               578-672
               

               Cow position:
               
               

               Alignm length:
               95
               

               Alignm identity:
               81
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               578-697
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               578-708
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               578-708
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               579-669
               

               Cow position:
               
               

               Alignm length:
               91
               

               Alignm identity:
               79
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               580-658
               

               Cow position:
               
               

               Alignm length:
               79
               

               Alignm identity:
               72
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               587-669
               

               Cow position:
               
               

               Alignm length:
               83
               

               Alignm identity:
               73
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               588-708
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               73, 0
               
Show alignments to all cow chromosomes.