Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8024D01.5 |
| Conread position: | 1-159 |
| Cow position: | chr2:40015332-40015170 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 29, 73 |
| Conread position: | 1-183 |
| Cow position: | chr2:44078639-44078451 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 2-192 |
| Cow position: | chr2:36661173-36660977 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 28, 15 |
| Conread position: | 3-187 |
| Cow position: | chr2:1332225-1332039 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 27, 14 |
| Conread position: | 3-192 |
| Cow position: | chr2:38876457-38876262 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 4-187 |
| Cow position: | chr2:37076647-37076833 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 26, 168 |
| Conread position: | 4-192 |
| Cow position: | chr2:2370572-2370374 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 17-192 |
| Cow position: | chr2:10970143-10970324 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 27-175 |
| Cow position: | chr2:47839267-47839420 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 51, 67 |
| Conread position: | 27-189 |
| Cow position: | chr2:16364389-16364558 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 28-181 |
| Cow position: | chr2:46296775-46296617 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 28-190 |
| Cow position: | chr2:46262982-46263147 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 78, 61 |
| Conread position: | 29-193 |
| Cow position: | chr2:69641403-69641235 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 37, 163 |
| Conread position: | 568-719 |
| Cow position: | chr2:8747705-8747854 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 15, 31 |
| Conread position: | 584-701 |
| Cow position: | chr2:1358530-1358649 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 599-719 |
| Cow position: | chr2:13369869-13369749 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 602-717 |
| Cow position: | chr2:67302228-67302113 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 10, 105 |
| Conread position: | 602-719 |
| Cow position: | chr2:67810831-67810948 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 605-719 |
| Cow position: | chr2:72359425-72359540 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 92 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 608-719 |
| Cow position: | chr2:42897871-42897760 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 89 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 608-719 |
| Cow position: | chr2:73924018-73923907 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 88 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 610-713 |
| Cow position: | chr2:36124634-36124531 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 84 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 610-717 |
| Cow position: | chr2:85794768-85794875 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 86 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 612-717 |
| Cow position: | chr2:21382650-21382756 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 92, 0 |
Show alignments to all cow chromosomes.