Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8003G04.5 |
| Conread position: | 290-562 |
| Cow position: | chr11:47884448-47884173 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 133, 92 |
| Conread position: | 308-430 |
| Cow position: | chr11:17706669-17706790 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 308-430 |
| Cow position: | chr11:75260087-75260211 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 308-432 |
| Cow position: | chr11:2421351-2421475 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 308-432 |
| Cow position: | chr11:5251892-5251769 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 308-432 |
| Cow position: | chr11:73450412-73450289 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 308-471 |
| Cow position: | chr11:6604972-6605140 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 123, 156 |
| Conread position: | 308-562 |
| Cow position: | chr11:48662737-48662467 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 44, 228 |
| Conread position: | 308-562 |
| Cow position: | chr11:55010849-55010578 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 200 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 308-562 |
| Cow position: | chr11:64125202-64125479 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 308-562 |
| Cow position: | chr11:82102965-82102694 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 59 |
| Conread position: | 313-467 |
| Cow position: | chr11:37915932-37916083 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 81, 120 |
| Conread position: | 315-562 |
| Cow position: | chr11:32600916-32601169 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 177 |
| Conread position: | 329-430 |
| Cow position: | chr11:33280052-33280153 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 84 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 331-562 |
| Cow position: | chr11:16197662-16197419 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 183 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 390-562 |
| Cow position: | chr11:8795920-8796086 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 149, 6 |
| Conread position: | 435-562 |
| Cow position: | chr11:40621160-40621286 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 439-562 |
| Cow position: | chr11:39660661-39660784 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.