Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8003G04.5 |
| Conread position: | 296-559 |
| Cow position: | chr13:20087044-20087320 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 88, 42 |
| Conread position: | 308-450 |
| Cow position: | chr13:43360526-43360385 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 135, 10 |
| Conread position: | 308-522 |
| Cow position: | chr13:52282316-52282086 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 126, 100 |
| Conread position: | 308-530 |
| Cow position: | chr13:16045823-16045598 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 308-556 |
| Cow position: | chr13:42570989-42571254 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 16, 25 |
| Conread position: | 308-560 |
| Cow position: | chr13:47645458-47645722 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 62, 40 |
| Conread position: | 308-560 |
| Cow position: | chr13:61031006-61030735 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 308-562 |
| Cow position: | chr13:19546425-19546149 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 82, 17 |
| Conread position: | 308-562 |
| Cow position: | chr13:31494824-31495088 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 200 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 68, 233 |
| Conread position: | 308-562 |
| Cow position: | chr13:41843200-41843472 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 95, 230 |
| Conread position: | 329-562 |
| Cow position: | chr13:20606512-20606733 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 56, 70 |
| Conread position: | 329-562 |
| Cow position: | chr13:34348496-34348757 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 330-429 |
| Cow position: | chr13:47664309-47664408 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 82 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 433-562 |
| Cow position: | chr13:12484860-12484989 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 435-562 |
| Cow position: | chr13:15591384-15591253 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 438-562 |
| Cow position: | chr13:28091465-28091343 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 76, 32 |
| Conread position: | 444-562 |
| Cow position: | chr13:38463408-38463291 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 86, 0 |
Show alignments to all cow chromosomes.