Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8003G04.5
        

               Conread position:
               307-560
               

               Cow position:
               chr22:10978088-10978352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               182
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               67, 187
               

               Conread position:
               308-430
               

               Cow position:
               chr22:45604977-45605100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               98
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               51, 57
               

               Conread position:
               308-459
               

               Cow position:
               chr22:26040124-26040268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               308-542
               

               Cow position:
               chr22:10468012-10467761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               112, 229
               

               Conread position:
               308-562
               

               Cow position:
               chr22:6555358-6555104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               188
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               108, 132
               

               Conread position:
               309-562
               

               Cow position:
               chr22:43969512-43969243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               89, 164
               

               Conread position:
               313-428
               

               Cow position:
               chr22:28532763-28532648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               329-427
               

               Cow position:
               chr22:3246870-3246772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               83
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               428-562
               

               Cow position:
               chr22:5459633-5459766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               438-562
               

               Cow position:
               chr22:22495589-22495712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               95
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               87, 0
               
Show alignments to all cow chromosomes.