Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8003G04.5 |
| Conread position: | 301-430 |
| Cow position: | chr3:71470722-71470851 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 308-432 |
| Cow position: | chr3:29842596-29842723 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 17, 112 |
| Conread position: | 308-487 |
| Cow position: | chr3:21278090-21277920 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 92, 59 |
| Conread position: | 308-528 |
| Cow position: | chr3:63496082-63496319 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 45, 164 |
| Conread position: | 308-532 |
| Cow position: | chr3:60492277-60492519 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 308-560 |
| Cow position: | chr3:62740109-62740384 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 212 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 80, 175 |
| Conread position: | 308-560 |
| Cow position: | chr3:84872071-84871800 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 68, 205 |
| Conread position: | 308-561 |
| Cow position: | chr3:60535744-60536002 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 97, 64 |
| Conread position: | 308-562 |
| Cow position: | chr3:41407950-41407697 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 89, 129 |
| Conread position: | 310-562 |
| Cow position: | chr3:61462711-61462445 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 74, 38 |
| Conread position: | 311-562 |
| Cow position: | chr3:51414870-51415143 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 28, 22 |
| Conread position: | 330-562 |
| Cow position: | chr3:548325-548573 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 55, 14 |
| Conread position: | 332-562 |
| Cow position: | chr3:29497293-29497048 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 56, 34 |
| Conread position: | 402-560 |
| Cow position: | chr3:47749356-47749190 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 40, 27 |
| Conread position: | 432-562 |
| Cow position: | chr3:9188259-9188389 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 436-562 |
| Cow position: | chr3:13508611-13508740 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 436-562 |
| Cow position: | chr3:29842868-29842994 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 37, 10 |
| Conread position: | 438-560 |
| Cow position: | chr3:36748260-36748380 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 438-562 |
| Cow position: | chr3:32198042-32197923 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 438-562 |
| Cow position: | chr3:73427480-73427606 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 438-562 |
| Cow position: | chr3:83998566-83998688 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 56, 0 |
Show alignments to all cow chromosomes.