Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8009L03.5
        

               Conread position:
               7-464
               

               Cow position:
               chr17:41440645-41440188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               273
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               251, 240
               

               Conread position:
               7-687
               

               Cow position:
               chr17:41441065-41440385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               689
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 98
               

               Conread position:
               7-696
               

               Cow position:
               chr17:44467330-44468022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               697
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 28
               

               Conread position:
               10-464
               

               Cow position:
               chr17:44467753-44468207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               287
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               80, 67
               

               Conread position:
               16-665
               

               Cow position:
               chr17:44467675-44468327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               654
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               239, 221
               

               Conread position:
               16-666
               

               Cow position:
               chr17:44467591-44468244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               658
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 59
               

               Conread position:
               19-496
               

               Cow position:
               chr17:41440801-41440324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               480
               

               Alignm identity:
               285
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               96, 102
               

               Conread position:
               22-553
               

               Cow position:
               chr17:44467849-44468380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               534
               

               Alignm identity:
               316
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               69, 53
               

               Conread position:
               36-688
               

               Cow position:
               chr17:41440868-41440213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               661
               

               Alignm identity:
               389
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               161, 169
               

               Conread position:
               39-691
               

               Cow position:
               chr17:41441117-41440462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               663
               

               Alignm identity:
               395
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               220, 208
               
Show alignments to all cow chromosomes.