Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8009L03.5 |
| Conread position: | 4-399 |
| Cow position: | chr18:47846629-47846234 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 245 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 71, 78 |
| Conread position: | 4-448 |
| Cow position: | chr18:54668804-54668363 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 278 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 187, 16 |
| Conread position: | 4-627 |
| Cow position: | chr18:56391459-56390833 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 177 |
| Conread position: | 7-245 |
| Cow position: | chr18:56391927-56391689 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 159, 167 |
| Conread position: | 7-499 |
| Cow position: | chr18:47846542-47846049 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 301 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 141, 121 |
| Conread position: | 9-621 |
| Cow position: | chr18:55497645-55497030 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 360 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 257, 228 |
| Conread position: | 16-244 |
| Cow position: | chr18:44818622-44818850 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 149, 158 |
| Conread position: | 16-687 |
| Cow position: | chr18:56329699-56329028 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 386 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 159, 150 |
| Conread position: | 18-696 |
| Cow position: | chr18:56391528-56390848 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 6 |
| Conread position: | 41-661 |
| Cow position: | chr18:56391590-56390967 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 70 |
| Conread position: | 73-368 |
| Cow position: | chr18:56391942-56391650 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 105, 34 |
| Conread position: | 109-688 |
| Cow position: | chr18:56329858-56329276 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 344 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 150, 138 |
| Conread position: | 110-488 |
| Cow position: | chr18:53610221-53609843 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 142, 123 |
| Conread position: | 113-658 |
| Cow position: | chr18:22844033-22843476 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 330 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 21, 15 |
| Conread position: | 133-413 |
| Cow position: | chr18:56391969-56391689 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 45, 50 |
| Conread position: | 133-574 |
| Cow position: | chr18:54668846-54668402 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 267 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 293, 277 |
| Conread position: | 154-688 |
| Cow position: | chr18:22844331-22843791 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 323 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 23, 29 |
| Conread position: | 177-682 |
| Cow position: | chr18:56329874-56329365 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 298 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 166, 151 |
| Conread position: | 257-496 |
| Cow position: | chr18:44818611-44818850 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 80, 70 |
| Conread position: | 380-592 |
| Cow position: | chr18:54687754-54687969 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 20, 28 |
Show alignments to all cow chromosomes.