Cow genome map

Conread name: Ss1.1-Pig4-TMW8016A06.3

Conread position: 385-495
Cow position:
Alignm length: 113
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 387-497
Cow position:
Alignm length: 111
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 387-497
Cow position:
Alignm length: 114
Alignm identity: 93
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 67, 11

Conread position: 392-516
Cow position:
Alignm length: 129
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 392-532
Cow position:
Alignm length: 145
Alignm identity: 107
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 402-494
Cow position:
Alignm length: 93
Alignm identity: 78
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 402-497
Cow position:
Alignm length: 96
Alignm identity: 80
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 402-505
Cow position:
Alignm length: 104
Alignm identity: 85
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 402-529
Cow position:
Alignm length: 128
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 403-496
Cow position:
Alignm length: 94
Alignm identity: 79
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 404-672
Cow position:
Alignm length: 270
Alignm identity: 191
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 103, 26

Conread position: 460-672
Cow position:
Alignm length: 213
Alignm identity: 148
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 547-671
Cow position:
Alignm length: 125
Alignm identity: 94
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 548-671
Cow position:
Alignm length: 124
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 548-672
Cow position:
Alignm length: 125
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 550-667
Cow position:
Alignm length: 118
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 552-672
Cow position:
Alignm length: 125
Alignm identity: 102
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 553-659
Cow position:
Alignm length: 107
Alignm identity: 89
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 553-672
Cow position:
Alignm length: 120
Alignm identity: 99
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-649
Cow position:
Alignm length: 96
Alignm identity: 81
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-650
Cow position:
Alignm length: 97
Alignm identity: 84
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-659
Cow position:
Alignm length: 106
Alignm identity: 90
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 102, 0

Conread position: 554-659
Cow position:
Alignm length: 106
Alignm identity: 88
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position:
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position:
Alignm length: 107
Alignm identity: 89
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position:
Alignm length: 107
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position:
Alignm length: 109
Alignm identity: 92
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 81

Conread position: 554-660
Cow position:
Alignm length: 107
Alignm identity: 90
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 554-663
Cow position:
Alignm length: 111
Alignm identity: 96
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 84, 80

Conread position: 554-663
Cow position:
Alignm length: 110
Alignm identity: 91
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-663
Cow position:
Alignm length: 110
Alignm identity: 95
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position:
Alignm length: 114
Alignm identity: 95
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position:
Alignm length: 115
Alignm identity: 95
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 554-667
Cow position:
Alignm length: 114
Alignm identity: 95
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 554-667
Cow position:
Alignm length: 114
Alignm identity: 93
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position:
Alignm length: 115
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 554-667
Cow position:
Alignm length: 114
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 554-667
Cow position:
Alignm length: 114
Alignm identity: 101
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position:
Alignm length: 118
Alignm identity: 99
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 75, 40

Conread position: 554-667
Cow position:
Alignm length: 114
Alignm identity: 97
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position:
Alignm length: 118
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 75

Conread position: 554-669
Cow position:
Alignm length: 117
Alignm identity: 98
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 50, 16

Conread position: 554-669
Cow position:
Alignm length: 116
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position:
Alignm length: 116
Alignm identity: 96
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 554-670
Cow position:
Alignm length: 117
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 554-671
Cow position:
Alignm length: 118
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 554-671
Cow position:
Alignm length: 118
Alignm identity: 94
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 554-671
Cow position:
Alignm length: 120
Alignm identity: 100
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 12, 0

Conread position: 554-671
Cow position:
Alignm length: 118
Alignm identity: 94
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position:
Alignm length: 119
Alignm identity: 94
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 61, 47

Conread position: 554-671
Cow position:
Alignm length: 118
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position:
Alignm length: 120
Alignm identity: 99
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 554-671
Cow position:
Alignm length: 118
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 554-671
Cow position:
Alignm length: 118
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 100, 0

Conread position: 554-671
Cow position:
Alignm length: 119
Alignm identity: 99
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 84, 78

Conread position: 554-671
Cow position:
Alignm length: 118
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position:
Alignm length: 121
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 85, 52

Conread position: 554-671
Cow position:
Alignm length: 118
Alignm identity: 95
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 554-671
Cow position:
Alignm length: 118
Alignm identity: 94
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 554-671
Cow position:
Alignm length: 118
Alignm identity: 95
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position:
Alignm length: 120
Alignm identity: 97
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 554-671
Cow position:
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 63, 82

Conread position: 554-671
Cow position:
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 83, 79

Conread position: 554-671
Cow position:
Alignm length: 118
Alignm identity: 96
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 554-671
Cow position:
Alignm length: 119
Alignm identity: 97
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 108, 45

Conread position: 554-671
Cow position:
Alignm length: 118
Alignm identity: 93
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position:
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 59, 40

Conread position: 554-672
Cow position:
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position:
Alignm length: 120
Alignm identity: 98
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 554-672
Cow position:
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position:
Alignm length: 119
Alignm identity: 102
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position:
Alignm length: 119
Alignm identity: 100
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position:
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 554-672
Cow position:
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position:
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position:
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 554-672
Cow position:
Alignm length: 120
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 112, 40

Conread position: 554-672
Cow position:
Alignm length: 121
Alignm identity: 99
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 84, 79

Conread position: 554-672
Cow position:
Alignm length: 119
Alignm identity: 99
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 80, 0

Conread position: 554-672
Cow position:
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 555-656
Cow position:
Alignm length: 103
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 84, 79

Conread position: 555-659
Cow position:
Alignm length: 105
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 555-663
Cow position:
Alignm length: 109
Alignm identity: 90
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 555-667
Cow position:
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 555-671
Cow position:
Alignm length: 117
Alignm identity: 99
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 49, 0

Conread position: 555-672
Cow position:
Alignm length: 118
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 556-654
Cow position:
Alignm length: 99
Alignm identity: 81
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 556-660
Cow position:
Alignm length: 109
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 16, 47

Conread position: 556-671
Cow position:
Alignm length: 116
Alignm identity: 92
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 556-671
Cow position:
Alignm length: 116
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 556-671
Cow position:
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 556-672
Cow position:
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 557-672
Cow position:
Alignm length: 116
Alignm identity: 92
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 559-667
Cow position:
Alignm length: 109
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 560-671
Cow position:
Alignm length: 112
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 561-667
Cow position:
Alignm length: 108
Alignm identity: 91
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 561-671
Cow position:
Alignm length: 112
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 43, 32

Conread position: 561-671
Cow position:
Alignm length: 111
Alignm identity: 88
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 6, 0

Conread position: 561-672
Cow position:
Alignm length: 112
Alignm identity: 94
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 561-672
Cow position:
Alignm length: 112
Alignm identity: 94
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 562-668
Cow position:
Alignm length: 108
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 562-672
Cow position:
Alignm length: 111
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 562-672
Cow position:
Alignm length: 111
Alignm identity: 92
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 564-671
Cow position:
Alignm length: 108
Alignm identity: 88
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 565-667
Cow position:
Alignm length: 103
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 566-672
Cow position:
Alignm length: 107
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 566-672
Cow position:
Alignm length: 107
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 567-672
Cow position:
Alignm length: 106
Alignm identity: 86
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 570-663
Cow position:
Alignm length: 94
Alignm identity: 79
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 570-671
Cow position:
Alignm length: 102
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 570-671
Cow position:
Alignm length: 102
Alignm identity: 85
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 571-671
Cow position:
Alignm length: 101
Alignm identity: 82
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 573-671
Cow position:
Alignm length: 99
Alignm identity: 81
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 583-671
Cow position:
Alignm length: 89
Alignm identity: 76
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.