Cow genome map

Conread name: Ss1.1-Pig4-TMW8016A06.3

Conread position: 381-671
Cow position:
Alignm length: 293
Alignm identity: 197
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 281, 12

Conread position: 385-667
Cow position:
Alignm length: 284
Alignm identity: 196
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 135, 7

Conread position: 387-495
Cow position:
Alignm length: 109
Alignm identity: 87
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 402-494
Cow position:
Alignm length: 93
Alignm identity: 80
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 402-496
Cow position:
Alignm length: 95
Alignm identity: 80
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 402-536
Cow position:
Alignm length: 135
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 122, 0

Conread position: 403-495
Cow position:
Alignm length: 93
Alignm identity: 78
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 410-670
Cow position:
Alignm length: 262
Alignm identity: 180
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 155, 102

Conread position: 419-672
Cow position:
Alignm length: 256
Alignm identity: 177
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 88, 181

Conread position: 538-667
Cow position:
Alignm length: 130
Alignm identity: 99
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 547-667
Cow position:
Alignm length: 122
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 91, 64

Conread position: 547-669
Cow position:
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 548-672
Cow position:
Alignm length: 127
Alignm identity: 101
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 549-672
Cow position:
Alignm length: 124
Alignm identity: 103
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 552-671
Cow position:
Alignm length: 122
Alignm identity: 100
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 52, 0

Conread position: 552-672
Cow position:
Alignm length: 121
Alignm identity: 93
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 554-656
Cow position:
Alignm length: 105
Alignm identity: 88
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 554-656
Cow position:
Alignm length: 103
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 554-656
Cow position:
Alignm length: 105
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 554-658
Cow position:
Alignm length: 108
Alignm identity: 89
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 554-659
Cow position:
Alignm length: 108
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 554-659
Cow position:
Alignm length: 106
Alignm identity: 89
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-659
Cow position:
Alignm length: 106
Alignm identity: 89
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 554-660
Cow position:
Alignm length: 107
Alignm identity: 91
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 554-660
Cow position:
Alignm length: 107
Alignm identity: 85
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position:
Alignm length: 107
Alignm identity: 90
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 98, 0

Conread position: 554-660
Cow position:
Alignm length: 107
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position:
Alignm length: 108
Alignm identity: 90
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 554-660
Cow position:
Alignm length: 107
Alignm identity: 85
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position:
Alignm length: 107
Alignm identity: 90
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-661
Cow position:
Alignm length: 110
Alignm identity: 88
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 554-662
Cow position:
Alignm length: 109
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-663
Cow position:
Alignm length: 110
Alignm identity: 92
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-663
Cow position:
Alignm length: 110
Alignm identity: 90
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-663
Cow position:
Alignm length: 110
Alignm identity: 90
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-663
Cow position:
Alignm length: 110
Alignm identity: 88
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 554-664
Cow position:
Alignm length: 111
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 554-664
Cow position:
Alignm length: 112
Alignm identity: 92
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 108, 0

Conread position: 554-667
Cow position:
Alignm length: 114
Alignm identity: 92
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 554-667
Cow position:
Alignm length: 114
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 554-667
Cow position:
Alignm length: 114
Alignm identity: 96
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 554-667
Cow position:
Alignm length: 115
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 84, 16

Conread position: 554-667
Cow position:
Alignm length: 114
Alignm identity: 93
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position:
Alignm length: 114
Alignm identity: 94
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 554-667
Cow position:
Alignm length: 114
Alignm identity: 94
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 554-667
Cow position:
Alignm length: 114
Alignm identity: 96
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 96, 0

Conread position: 554-667
Cow position:
Alignm length: 115
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 84, 37

Conread position: 554-667
Cow position:
Alignm length: 114
Alignm identity: 93
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position:
Alignm length: 114
Alignm identity: 94
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position:
Alignm length: 114
Alignm identity: 95
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position:
Alignm length: 115
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 106, 0

Conread position: 554-667
Cow position:
Alignm length: 114
Alignm identity: 90
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position:
Alignm length: 114
Alignm identity: 93
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position:
Alignm length: 114
Alignm identity: 98
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position:
Alignm length: 116
Alignm identity: 96
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position:
Alignm length: 117
Alignm identity: 97
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 83, 78

Conread position: 554-671
Cow position:
Alignm length: 118
Alignm identity: 95
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position:
Alignm length: 118
Alignm identity: 104
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position:
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 554-671
Cow position:
Alignm length: 118
Alignm identity: 94
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position:
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 554-671
Cow position:
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 58, 37

Conread position: 554-671
Cow position:
Alignm length: 118
Alignm identity: 97
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position:
Alignm length: 118
Alignm identity: 97
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position:
Alignm length: 118
Alignm identity: 98
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 554-671
Cow position:
Alignm length: 121
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 85, 80

Conread position: 554-671
Cow position:
Alignm length: 118
Alignm identity: 93
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 554-671
Cow position:
Alignm length: 118
Alignm identity: 95
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position:
Alignm length: 119
Alignm identity: 95
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 98, 18

Conread position: 554-671
Cow position:
Alignm length: 118
Alignm identity: 98
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position:
Alignm length: 120
Alignm identity: 99
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 49, 0

Conread position: 554-671
Cow position:
Alignm length: 118
Alignm identity: 97
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 98, 0

Conread position: 554-671
Cow position:
Alignm length: 118
Alignm identity: 93
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 554-671
Cow position:
Alignm length: 118
Alignm identity: 97
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 23, 0

Conread position: 554-671
Cow position:
Alignm length: 118
Alignm identity: 95
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position:
Alignm length: 119
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 83, 59

Conread position: 554-671
Cow position:
Alignm length: 118
Alignm identity: 93
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position:
Alignm length: 118
Alignm identity: 94
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position:
Alignm length: 118
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 554-672
Cow position:
Alignm length: 119
Alignm identity: 103
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position:
Alignm length: 123
Alignm identity: 100
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 554-672
Cow position:
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position:
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 554-672
Cow position:
Alignm length: 120
Alignm identity: 98
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 554-672
Cow position:
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position:
Alignm length: 120
Alignm identity: 101
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 50, 29

Conread position: 554-672
Cow position:
Alignm length: 119
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 554-672
Cow position:
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 554-672
Cow position:
Alignm length: 119
Alignm identity: 92
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 554-672
Cow position:
Alignm length: 121
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 100, 0

Conread position: 554-672
Cow position:
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 554-672
Cow position:
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 554-672
Cow position:
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 554-672
Cow position:
Alignm length: 122
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 47

Conread position: 555-660
Cow position:
Alignm length: 109
Alignm identity: 92
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 555-668
Cow position:
Alignm length: 115
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 20, 13

Conread position: 555-671
Cow position:
Alignm length: 117
Alignm identity: 100
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 65, 0

Conread position: 555-671
Cow position:
Alignm length: 117
Alignm identity: 94
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 555-671
Cow position:
Alignm length: 117
Alignm identity: 97
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 555-672
Cow position:
Alignm length: 118
Alignm identity: 95
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 555-672
Cow position:
Alignm length: 118
Alignm identity: 98
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 555-672
Cow position:
Alignm length: 118
Alignm identity: 97
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 556-667
Cow position:
Alignm length: 115
Alignm identity: 97
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 556-671
Cow position:
Alignm length: 116
Alignm identity: 97
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 556-671
Cow position:
Alignm length: 117
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 556-671
Cow position:
Alignm length: 116
Alignm identity: 100
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 556-671
Cow position:
Alignm length: 116
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 556-671
Cow position:
Alignm length: 116
Alignm identity: 91
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 556-672
Cow position:
Alignm length: 119
Alignm identity: 95
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 82, 38

Conread position: 557-671
Cow position:
Alignm length: 116
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 47, 9

Conread position: 558-671
Cow position:
Alignm length: 114
Alignm identity: 91
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 559-666
Cow position:
Alignm length: 109
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 25, 36

Conread position: 560-663
Cow position:
Alignm length: 104
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 560-672
Cow position:
Alignm length: 113
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 561-661
Cow position:
Alignm length: 101
Alignm identity: 84
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 561-667
Cow position:
Alignm length: 108
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 561-669
Cow position:
Alignm length: 109
Alignm identity: 92
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 561-669
Cow position:
Alignm length: 109
Alignm identity: 91
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 561-671
Cow position:
Alignm length: 111
Alignm identity: 92
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 561-672
Cow position:
Alignm length: 112
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 561-672
Cow position:
Alignm length: 114
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 43, 56

Conread position: 562-671
Cow position:
Alignm length: 110
Alignm identity: 89
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 562-672
Cow position:
Alignm length: 111
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 564-664
Cow position:
Alignm length: 102
Alignm identity: 85
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 98, 0

Conread position: 564-667
Cow position:
Alignm length: 104
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 564-667
Cow position:
Alignm length: 104
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 564-669
Cow position:
Alignm length: 106
Alignm identity: 88
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 564-672
Cow position:
Alignm length: 109
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 565-667
Cow position:
Alignm length: 104
Alignm identity: 86
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 565-672
Cow position:
Alignm length: 108
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 567-671
Cow position:
Alignm length: 105
Alignm identity: 84
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 567-671
Cow position:
Alignm length: 105
Alignm identity: 87
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 568-672
Cow position:
Alignm length: 105
Alignm identity: 90
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 570-667
Cow position:
Alignm length: 98
Alignm identity: 82
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 570-672
Cow position:
Alignm length: 103
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 573-671
Cow position:
Alignm length: 99
Alignm identity: 87
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 574-672
Cow position:
Alignm length: 99
Alignm identity: 81
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 574-672
Cow position:
Alignm length: 99
Alignm identity: 84
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.