Cow genome map

Conread name: Ss1.1-Pig4-TMW8016A06.3

Conread position: 400-511
Cow position:
Alignm length: 114
Alignm identity: 94
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 98, 0

Conread position: 402-495
Cow position:
Alignm length: 94
Alignm identity: 79
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 402-496
Cow position:
Alignm length: 95
Alignm identity: 79
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 402-505
Cow position:
Alignm length: 104
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 409-497
Cow position:
Alignm length: 89
Alignm identity: 76
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 418-672
Cow position:
Alignm length: 258
Alignm identity: 181
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 81, 10

Conread position: 547-667
Cow position:
Alignm length: 121
Alignm identity: 98
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 87, 0

Conread position: 547-667
Cow position:
Alignm length: 122
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 91, 8

Conread position: 547-667
Cow position:
Alignm length: 121
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 548-672
Cow position:
Alignm length: 125
Alignm identity: 99
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 549-660
Cow position:
Alignm length: 113
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 95, 51

Conread position: 549-667
Cow position:
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 550-660
Cow position:
Alignm length: 113
Alignm identity: 94
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 25, 41

Conread position: 551-667
Cow position:
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 552-667
Cow position:
Alignm length: 117
Alignm identity: 96
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 91, 0

Conread position: 552-667
Cow position:
Alignm length: 118
Alignm identity: 93
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 552-668
Cow position:
Alignm length: 117
Alignm identity: 93
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 552-671
Cow position:
Alignm length: 120
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 552-672
Cow position:
Alignm length: 122
Alignm identity: 105
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 86, 82

Conread position: 554-656
Cow position:
Alignm length: 103
Alignm identity: 87
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-658
Cow position:
Alignm length: 107
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 554-658
Cow position:
Alignm length: 105
Alignm identity: 86
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 554-659
Cow position:
Alignm length: 106
Alignm identity: 90
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-659
Cow position:
Alignm length: 106
Alignm identity: 89
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-659
Cow position:
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 554-659
Cow position:
Alignm length: 106
Alignm identity: 90
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 554-660
Cow position:
Alignm length: 108
Alignm identity: 88
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 83, 69

Conread position: 554-660
Cow position:
Alignm length: 107
Alignm identity: 87
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 554-660
Cow position:
Alignm length: 107
Alignm identity: 91
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 554-660
Cow position:
Alignm length: 108
Alignm identity: 92
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 54, 7

Conread position: 554-660
Cow position:
Alignm length: 107
Alignm identity: 86
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position:
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position:
Alignm length: 107
Alignm identity: 86
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 554-660
Cow position:
Alignm length: 109
Alignm identity: 92
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 554-660
Cow position:
Alignm length: 107
Alignm identity: 91
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position:
Alignm length: 107
Alignm identity: 91
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 554-660
Cow position:
Alignm length: 107
Alignm identity: 90
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 554-662
Cow position:
Alignm length: 109
Alignm identity: 89
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-663
Cow position:
Alignm length: 111
Alignm identity: 92
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 554-663
Cow position:
Alignm length: 110
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-664
Cow position:
Alignm length: 112
Alignm identity: 94
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 554-666
Cow position:
Alignm length: 114
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 84, 80

Conread position: 554-666
Cow position:
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 554-666
Cow position:
Alignm length: 114
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 554-666
Cow position:
Alignm length: 113
Alignm identity: 90
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 554-666
Cow position:
Alignm length: 113
Alignm identity: 96
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position:
Alignm length: 114
Alignm identity: 96
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 85, 0

Conread position: 554-667
Cow position:
Alignm length: 115
Alignm identity: 98
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 54, 0

Conread position: 554-667
Cow position:
Alignm length: 116
Alignm identity: 96
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 554-667
Cow position:
Alignm length: 114
Alignm identity: 95
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position:
Alignm length: 114
Alignm identity: 91
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 554-667
Cow position:
Alignm length: 115
Alignm identity: 98
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 85, 5

Conread position: 554-667
Cow position:
Alignm length: 114
Alignm identity: 96
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 554-667
Cow position:
Alignm length: 114
Alignm identity: 92
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position:
Alignm length: 114
Alignm identity: 97
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 554-667
Cow position:
Alignm length: 114
Alignm identity: 90
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-668
Cow position:
Alignm length: 115
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 92, 0

Conread position: 554-668
Cow position:
Alignm length: 116
Alignm identity: 93
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 50, 31

Conread position: 554-669
Cow position:
Alignm length: 116
Alignm identity: 96
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 554-669
Cow position:
Alignm length: 116
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 554-669
Cow position:
Alignm length: 116
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 554-669
Cow position:
Alignm length: 116
Alignm identity: 96
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 554-669
Cow position:
Alignm length: 116
Alignm identity: 98
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 47, 0

Conread position: 554-669
Cow position:
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 84, 40

Conread position: 554-670
Cow position:
Alignm length: 117
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 554-670
Cow position:
Alignm length: 118
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 108, 0

Conread position: 554-671
Cow position:
Alignm length: 119
Alignm identity: 101
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 50, 75

Conread position: 554-671
Cow position:
Alignm length: 118
Alignm identity: 94
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 554-671
Cow position:
Alignm length: 118
Alignm identity: 98
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position:
Alignm length: 118
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 554-671
Cow position:
Alignm length: 118
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position:
Alignm length: 118
Alignm identity: 93
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 554-671
Cow position:
Alignm length: 119
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 75, 17

Conread position: 554-671
Cow position:
Alignm length: 118
Alignm identity: 94
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position:
Alignm length: 118
Alignm identity: 96
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 554-671
Cow position:
Alignm length: 119
Alignm identity: 103
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 51, 0

Conread position: 554-671
Cow position:
Alignm length: 119
Alignm identity: 97
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 85, 80

Conread position: 554-671
Cow position:
Alignm length: 120
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 52

Conread position: 554-671
Cow position:
Alignm length: 118
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 554-671
Cow position:
Alignm length: 118
Alignm identity: 94
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 97, 0

Conread position: 554-671
Cow position:
Alignm length: 118
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position:
Alignm length: 118
Alignm identity: 93
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-671
Cow position:
Alignm length: 120
Alignm identity: 99
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 554-671
Cow position:
Alignm length: 121
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 554-672
Cow position:
Alignm length: 120
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 554-672
Cow position:
Alignm length: 119
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 554-672
Cow position:
Alignm length: 122
Alignm identity: 96
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 19, 47

Conread position: 554-672
Cow position:
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position:
Alignm length: 120
Alignm identity: 96
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 83, 46

Conread position: 554-672
Cow position:
Alignm length: 120
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 554-672
Cow position:
Alignm length: 120
Alignm identity: 98
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 116, 0

Conread position: 554-672
Cow position:
Alignm length: 119
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 554-672
Cow position:
Alignm length: 119
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 554-672
Cow position:
Alignm length: 119
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 554-672
Cow position:
Alignm length: 120
Alignm identity: 97
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 88, 79

Conread position: 554-672
Cow position:
Alignm length: 120
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 554-672
Cow position:
Alignm length: 119
Alignm identity: 100
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 554-672
Cow position:
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position:
Alignm length: 121
Alignm identity: 100
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 554-672
Cow position:
Alignm length: 119
Alignm identity: 92
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 554-672
Cow position:
Alignm length: 120
Alignm identity: 100
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 84, 80

Conread position: 554-672
Cow position:
Alignm length: 120
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 555-663
Cow position:
Alignm length: 109
Alignm identity: 93
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 555-667
Cow position:
Alignm length: 114
Alignm identity: 95
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 555-671
Cow position:
Alignm length: 117
Alignm identity: 100
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 555-671
Cow position:
Alignm length: 118
Alignm identity: 96
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 556-656
Cow position:
Alignm length: 102
Alignm identity: 86
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 556-656
Cow position:
Alignm length: 102
Alignm identity: 87
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 556-671
Cow position:
Alignm length: 119
Alignm identity: 98
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 556-671
Cow position:
Alignm length: 116
Alignm identity: 93
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 556-671
Cow position:
Alignm length: 116
Alignm identity: 99
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 27, 0

Conread position: 556-672
Cow position:
Alignm length: 118
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 557-660
Cow position:
Alignm length: 104
Alignm identity: 88
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 557-660
Cow position:
Alignm length: 104
Alignm identity: 85
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 557-669
Cow position:
Alignm length: 113
Alignm identity: 94
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 557-669
Cow position:
Alignm length: 113
Alignm identity: 94
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 73, 0

Conread position: 558-671
Cow position:
Alignm length: 117
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 558-672
Cow position:
Alignm length: 116
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 111, 50

Conread position: 560-667
Cow position:
Alignm length: 108
Alignm identity: 88
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 560-669
Cow position:
Alignm length: 110
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 560-671
Cow position:
Alignm length: 113
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 78, 74

Conread position: 561-667
Cow position:
Alignm length: 107
Alignm identity: 85
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 561-671
Cow position:
Alignm length: 111
Alignm identity: 93
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 561-671
Cow position:
Alignm length: 111
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 561-671
Cow position:
Alignm length: 111
Alignm identity: 92
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 562-660
Cow position:
Alignm length: 99
Alignm identity: 82
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 562-667
Cow position:
Alignm length: 106
Alignm identity: 86
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 562-672
Cow position:
Alignm length: 112
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 108, 0

Conread position: 563-672
Cow position:
Alignm length: 110
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 564-660
Cow position:
Alignm length: 97
Alignm identity: 82
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 564-667
Cow position:
Alignm length: 104
Alignm identity: 86
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 564-671
Cow position:
Alignm length: 108
Alignm identity: 89
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 564-672
Cow position:
Alignm length: 110
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 565-671
Cow position:
Alignm length: 109
Alignm identity: 90
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 567-671
Cow position:
Alignm length: 105
Alignm identity: 85
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 568-660
Cow position:
Alignm length: 93
Alignm identity: 78
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 569-672
Cow position:
Alignm length: 105
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 68

Conread position: 570-663
Cow position:
Alignm length: 94
Alignm identity: 81
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 570-671
Cow position:
Alignm length: 102
Alignm identity: 85
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 571-667
Cow position:
Alignm length: 97
Alignm identity: 81
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 571-671
Cow position:
Alignm length: 101
Alignm identity: 82
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 575-671
Cow position:
Alignm length: 99
Alignm identity: 84
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 64, 25

Conread position: 578-672
Cow position:
Alignm length: 95
Alignm identity: 79
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.