Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8016A06.3 |
| Conread position: | 402-496 |
| Cow position: | chr26:32601006-32601100 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 81 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 402-507 |
| Cow position: | chr26:14395580-14395473 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 88 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 402-667 |
| Cow position: | chr26:19842188-19842444 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 202, 46 |
| Conread position: | 402-670 |
| Cow position: | chr26:25442289-25442031 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 235, 64 |
| Conread position: | 411-515 |
| Cow position: | chr26:8352623-8352729 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 88 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 547-672 |
| Cow position: | chr26:31701550-31701675 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 551-660 |
| Cow position: | chr26:32955885-32955776 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 551-672 |
| Cow position: | chr26:33044820-33044941 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 554-659 |
| Cow position: | chr26:21929874-21929979 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 554-660 |
| Cow position: | chr26:6188038-6188144 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 86 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 554-660 |
| Cow position: | chr26:9491670-9491774 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 554-660 |
| Cow position: | chr26:20182502-20182608 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 554-660 |
| Cow position: | chr26:31462615-31462720 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 86 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 554-663 |
| Cow position: | chr26:13270936-13270827 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 554-663 |
| Cow position: | chr26:16796488-16796382 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 91 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 554-664 |
| Cow position: | chr26:29716816-29716925 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 90, 21 |
| Conread position: | 554-664 |
| Cow position: | chr26:30652376-30652267 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 91 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 554-666 |
| Cow position: | chr26:6322339-6322451 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 554-667 |
| Cow position: | chr26:8352701-8352813 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 554-667 |
| Cow position: | chr26:8700308-8700195 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 554-667 |
| Cow position: | chr26:13021407-13021294 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 554-667 |
| Cow position: | chr26:27491760-27491650 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 554-667 |
| Cow position: | chr26:34739519-34739631 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 554-668 |
| Cow position: | chr26:6037698-6037584 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 90 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 554-669 |
| Cow position: | chr26:4585468-4585353 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 554-669 |
| Cow position: | chr26:18231109-18231223 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 554-669 |
| Cow position: | chr26:23926235-23926122 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 554-671 |
| Cow position: | chr26:3072221-3072104 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 54, 39 |
| Conread position: | 554-671 |
| Cow position: | chr26:6447865-6447748 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 93 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 65, 45 |
| Conread position: | 554-671 |
| Cow position: | chr26:11263379-11263496 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 554-671 |
| Cow position: | chr26:12807772-12807658 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 554-671 |
| Cow position: | chr26:14174038-14174155 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 554-671 |
| Cow position: | chr26:15857418-15857535 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 554-671 |
| Cow position: | chr26:16549722-16549839 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 554-671 |
| Cow position: | chr26:22180242-22180359 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 554-672 |
| Cow position: | chr26:4444590-4444472 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 554-672 |
| Cow position: | chr26:6714541-6714423 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 554-672 |
| Cow position: | chr26:12238301-12238184 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 554-672 |
| Cow position: | chr26:16167171-16167053 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 554-672 |
| Cow position: | chr26:16585132-16585249 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 93 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 554-672 |
| Cow position: | chr26:24226685-24226567 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 92 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 554-672 |
| Cow position: | chr26:25737213-25737331 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 93 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 554-672 |
| Cow position: | chr26:26466976-26466861 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 554-672 |
| Cow position: | chr26:30752122-30752004 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 555-660 |
| Cow position: | chr26:7525725-7525620 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 555-660 |
| Cow position: | chr26:31137981-31137877 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 555-667 |
| Cow position: | chr26:11134953-11134842 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 555-667 |
| Cow position: | chr26:33202315-33202204 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 91 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 555-672 |
| Cow position: | chr26:26670999-26670887 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 555-672 |
| Cow position: | chr26:28442262-28442148 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 556-669 |
| Cow position: | chr26:4363049-4363161 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 556-669 |
| Cow position: | chr26:26888390-26888277 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 556-672 |
| Cow position: | chr26:33475417-33475533 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 90 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 557-660 |
| Cow position: | chr26:6030018-6029915 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 86 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 558-671 |
| Cow position: | chr26:3706546-3706659 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 560-667 |
| Cow position: | chr26:10209237-10209129 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 87 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 560-672 |
| Cow position: | chr26:32898123-32898011 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 561-669 |
| Cow position: | chr26:9082478-9082370 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 44, 60 |
| Conread position: | 562-671 |
| Cow position: | chr26:6827916-6828025 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 75, 67 |
| Conread position: | 567-671 |
| Cow position: | chr26:3182194-3182090 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 571-672 |
| Cow position: | chr26:24280588-24280689 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 83 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 572-660 |
| Cow position: | chr26:30034645-30034557 (view UCSC Genome Browser custom track) |
| Alignm length: | 90 |
| Alignm identity: | 80 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 66, 62 |
| Conread position: | 574-667 |
| Cow position: | chr26:6793703-6793796 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 82 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 577-671 |
| Cow position: | chr26:17057448-17057541 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 81 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
Show alignments to all cow chromosomes.