Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8016A06.3
        

               Conread position:
               381-533
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               130, 22
               

               Conread position:
               395-667
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               176, 30
               

               Conread position:
               402-497
               

               Cow position:
               
               

               Alignm length:
               96
               

               Alignm identity:
               81
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               403-511
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               408-496
               

               Cow position:
               
               

               Alignm length:
               89
               

               Alignm identity:
               76
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               547-667
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               547-667
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               548-672
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               14, 9
               

               Conread position:
               551-671
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               87, 83
               

               Conread position:
               551-671
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               552-651
               

               Cow position:
               
               

               Alignm length:
               100
               

               Alignm identity:
               85
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               552-664
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               110, 82
               

               Conread position:
               552-669
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               96
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               15, 68
               

               Conread position:
               552-672
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               554-654
               

               Cow position:
               
               

               Alignm length:
               101
               

               Alignm identity:
               82
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               554-655
               

               Cow position:
               
               

               Alignm length:
               103
               

               Alignm identity:
               88
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               19, 54
               

               Conread position:
               554-655
               

               Cow position:
               
               

               Alignm length:
               102
               

               Alignm identity:
               87
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               554-656
               

               Cow position:
               
               

               Alignm length:
               103
               

               Alignm identity:
               87
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               554-657
               

               Cow position:
               
               

               Alignm length:
               106
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               42, 16
               

               Conread position:
               554-658
               

               Cow position:
               
               

               Alignm length:
               105
               

               Alignm identity:
               84
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               554-658
               

               Cow position:
               
               

               Alignm length:
               106
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               554-659
               

               Cow position:
               
               

               Alignm length:
               106
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               554-659
               

               Cow position:
               
               

               Alignm length:
               106
               

               Alignm identity:
               86
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               554-660
               

               Cow position:
               
               

               Alignm length:
               107
               

               Alignm identity:
               88
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               554-660
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               83, 78
               

               Conread position:
               554-661
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               91
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               13, 42
               

               Conread position:
               554-663
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               554-663
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               90
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               554-663
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               87
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               554-666
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               88
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               554-667
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               554-667
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               554-667
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               554-667
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               554-667
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               554-667
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               554-667
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               93
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               554-667
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               554-669
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               554-669
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               554-669
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               554-670
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               91
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               554-670
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               94
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               554-671
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               92
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               554-671
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               554-671
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               554-671
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               554-671
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               554-671
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               554-671
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               554-671
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               554-671
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               554-671
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               554-671
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               554-671
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               554-671
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               83, 70
               

               Conread position:
               554-671
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               554-672
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               81, 70
               

               Conread position:
               554-672
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               554-672
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               92
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               554-672
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               554-672
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               91
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               554-672
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               101
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               84, 7
               

               Conread position:
               554-672
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               92
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               554-672
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               554-672
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               92
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               554-672
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               554-672
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               554-672
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               92
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               554-672
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               554-672
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               554-672
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               554-672
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               92, 45
               

               Conread position:
               554-672
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               555-659
               

               Cow position:
               
               

               Alignm length:
               105
               

               Alignm identity:
               85
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               555-660
               

               Cow position:
               
               

               Alignm length:
               106
               

               Alignm identity:
               87
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               555-660
               

               Cow position:
               
               

               Alignm length:
               106
               

               Alignm identity:
               85
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               555-667
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               91
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               555-667
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               555-672
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               84, 61
               

               Conread position:
               555-672
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               556-672
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               556-672
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               97
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               19, 80
               

               Conread position:
               556-672
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               556-672
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               557-667
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               90
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               557-671
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               91
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               558-667
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               560-667
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               560-672
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               78, 56
               

               Conread position:
               561-667
               

               Cow position:
               
               

               Alignm length:
               107
               

               Alignm identity:
               85
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               561-672
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               561-672
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               562-668
               

               Cow position:
               
               

               Alignm length:
               107
               

               Alignm identity:
               85
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               563-671
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               87
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               565-672
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               87
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               565-672
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               90
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               569-667
               

               Cow position:
               
               

               Alignm length:
               100
               

               Alignm identity:
               85
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               5, 33
               

               Conread position:
               579-671
               

               Cow position:
               
               

               Alignm length:
               93
               

               Alignm identity:
               79
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               582-672
               

               Cow position:
               
               

               Alignm length:
               92
               

               Alignm identity:
               81
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               22, 0
               
Show alignments to all cow chromosomes.