Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8016A06.3
        

               Conread position:
               384-501
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               402-496
               

               Cow position:
               
               

               Alignm length:
               95
               

               Alignm identity:
               80
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               402-536
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               403-505
               

               Cow position:
               
               

               Alignm length:
               103
               

               Alignm identity:
               86
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               545-671
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               548-667
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               548-672
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               96
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               550-667
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               93
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               88, 84
               

               Conread position:
               554-656
               

               Cow position:
               
               

               Alignm length:
               103
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               554-656
               

               Cow position:
               
               

               Alignm length:
               103
               

               Alignm identity:
               86
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               554-659
               

               Cow position:
               
               

               Alignm length:
               106
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               554-659
               

               Cow position:
               
               

               Alignm length:
               106
               

               Alignm identity:
               86
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               554-659
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               554-659
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               89
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               49, 80
               

               Conread position:
               554-660
               

               Cow position:
               
               

               Alignm length:
               107
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               554-660
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               92
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               554-660
               

               Cow position:
               
               

               Alignm length:
               107
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               554-660
               

               Cow position:
               
               

               Alignm length:
               107
               

               Alignm identity:
               90
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               554-660
               

               Cow position:
               
               

               Alignm length:
               107
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               554-660
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               87
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               554-660
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               554-660
               

               Cow position:
               
               

               Alignm length:
               107
               

               Alignm identity:
               88
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               554-660
               

               Cow position:
               
               

               Alignm length:
               107
               

               Alignm identity:
               88
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               554-661
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               50, 105
               

               Conread position:
               554-663
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               554-663
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               88
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               554-664
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               108, 45
               

               Conread position:
               554-666
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               50, 24
               

               Conread position:
               554-666
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               554-667
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               554-667
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               97
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               21, 81
               

               Conread position:
               554-667
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               95
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               554-667
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               554-667
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               554-667
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               92
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               554-667
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               94
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               554-667
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               554-667
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               95
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               103, 20
               

               Conread position:
               554-667
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               554-667
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               94
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               83, 59
               

               Conread position:
               554-667
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               554-667
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               95
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               554-667
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               91
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               84, 80
               

               Conread position:
               554-667
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               92
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               554-668
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               554-669
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               554-669
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               554-669
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               94
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               52, 7
               

               Conread position:
               554-670
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               106, 45
               

               Conread position:
               554-671
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               554-671
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               554-671
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               554-671
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               554-671
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               554-671
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               96
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               554-671
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               554-671
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               554-671
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               554-671
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               554-671
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               554-671
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               554-671
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               554-671
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               554-671
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               554-672
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               554-672
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               554-672
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               554-672
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               99
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               70, 81
               

               Conread position:
               554-672
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               554-672
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               554-672
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               90, 97
               

               Conread position:
               554-672
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               554-672
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               45, 20
               

               Conread position:
               554-672
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               554-672
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               555-660
               

               Cow position:
               
               

               Alignm length:
               106
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               555-667
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               90
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               555-672
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               102
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               555-672
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               556-667
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               42, 114
               

               Conread position:
               556-672
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               557-669
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               557-671
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               91
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               557-672
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               558-663
               

               Cow position:
               
               

               Alignm length:
               106
               

               Alignm identity:
               90
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               558-672
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               558-672
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               560-670
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               89
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               560-672
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               91
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               561-667
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               89
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               40, 18
               

               Conread position:
               561-667
               

               Cow position:
               
               

               Alignm length:
               107
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               564-669
               

               Cow position:
               
               

               Alignm length:
               106
               

               Alignm identity:
               86
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               564-672
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               86
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               565-672
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               566-660
               

               Cow position:
               
               

               Alignm length:
               95
               

               Alignm identity:
               80
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               566-671
               

               Cow position:
               
               

               Alignm length:
               106
               

               Alignm identity:
               85
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               568-667
               

               Cow position:
               
               

               Alignm length:
               100
               

               Alignm identity:
               86
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               568-672
               

               Cow position:
               
               

               Alignm length:
               105
               

               Alignm identity:
               88
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               569-672
               

               Cow position:
               
               

               Alignm length:
               104
               

               Alignm identity:
               87
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               570-660
               

               Cow position:
               
               

               Alignm length:
               91
               

               Alignm identity:
               79
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               570-671
               

               Cow position:
               
               

               Alignm length:
               103
               

               Alignm identity:
               85
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               68, 64
               

               Conread position:
               573-667
               

               Cow position:
               
               

               Alignm length:
               95
               

               Alignm identity:
               81
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               575-671
               

               Cow position:
               
               

               Alignm length:
               97
               

               Alignm identity:
               80
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               581-667
               

               Cow position:
               
               

               Alignm length:
               87
               

               Alignm identity:
               76
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               586-671
               

               Cow position:
               
               

               Alignm length:
               86
               

               Alignm identity:
               75
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.