Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8016A06.3 |
| Conread position: | 380-672 |
| Cow position: | chr6:55366741-55366438 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 8, 19 |
| Conread position: | 387-496 |
| Cow position: | chr6:10332442-10332334 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 90 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 402-495 |
| Cow position: | chr6:59620318-59620412 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 82 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 402-501 |
| Cow position: | chr6:24902459-24902360 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 82 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 402-505 |
| Cow position: | chr6:37148500-37148603 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 86 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 403-498 |
| Cow position: | chr6:2894907-2895002 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 81 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 410-672 |
| Cow position: | chr6:45160680-45160409 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 79, 204 |
| Conread position: | 427-663 |
| Cow position: | chr6:44194907-44194671 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 10, 83 |
| Conread position: | 542-650 |
| Cow position: | chr6:40138952-40138844 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 544-672 |
| Cow position: | chr6:41375509-41375635 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 64, 6 |
| Conread position: | 545-671 |
| Cow position: | chr6:61113506-61113632 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 546-660 |
| Cow position: | chr6:20098207-20098093 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 547-660 |
| Cow position: | chr6:4383252-4383363 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 547-667 |
| Cow position: | chr6:2547001-2547118 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 547-669 |
| Cow position: | chr6:8637033-8637155 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 547-672 |
| Cow position: | chr6:1784014-1783889 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 115, 77 |
| Conread position: | 548-663 |
| Cow position: | chr6:35471767-35471649 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 549-672 |
| Cow position: | chr6:61978421-61978298 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 550-672 |
| Cow position: | chr6:55608045-55607923 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 552-672 |
| Cow position: | chr6:20231062-20230943 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 554-644 |
| Cow position: | chr6:33451732-33451821 (view UCSC Genome Browser custom track) |
| Alignm length: | 91 |
| Alignm identity: | 79 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 554-648 |
| Cow position: | chr6:20245849-20245943 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 81 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 554-650 |
| Cow position: | chr6:62015410-62015506 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 84 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 554-654 |
| Cow position: | chr6:8599555-8599656 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 86 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 554-656 |
| Cow position: | chr6:16397417-16397315 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 88 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 88, 80 |
| Conread position: | 554-656 |
| Cow position: | chr6:54132583-54132685 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 554-658 |
| Cow position: | chr6:24327370-24327269 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 554-658 |
| Cow position: | chr6:60467793-60467894 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 91 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 554-659 |
| Cow position: | chr6:31525814-31525918 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 86 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 554-659 |
| Cow position: | chr6:49398851-49398746 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 89 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 554-660 |
| Cow position: | chr6:1002469-1002362 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 42, 29 |
| Conread position: | 554-660 |
| Cow position: | chr6:13741462-13741566 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 554-660 |
| Cow position: | chr6:16700024-16700130 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 554-660 |
| Cow position: | chr6:24781798-24781693 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 91 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 85, 45 |
| Conread position: | 554-660 |
| Cow position: | chr6:35181488-35181382 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 554-660 |
| Cow position: | chr6:36195979-36196085 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 554-660 |
| Cow position: | chr6:50445994-50445892 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 554-660 |
| Cow position: | chr6:51835165-51835271 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 554-663 |
| Cow position: | chr6:1944496-1944600 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 92 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 554-663 |
| Cow position: | chr6:32916155-32916046 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 92 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 554-663 |
| Cow position: | chr6:56842925-56843033 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 91 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 554-663 |
| Cow position: | chr6:64449157-64449263 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 92 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 40, 72 |
| Conread position: | 554-665 |
| Cow position: | chr6:11192687-11192575 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 554-666 |
| Cow position: | chr6:2012784-2012896 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 554-667 |
| Cow position: | chr6:642812-642699 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 90 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 554-667 |
| Cow position: | chr6:6060792-6060679 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 95 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 554-667 |
| Cow position: | chr6:7103470-7103358 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 92 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 50, 27 |
| Conread position: | 554-667 |
| Cow position: | chr6:8209823-8209711 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 554-667 |
| Cow position: | chr6:8562481-8562594 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 89 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 554-667 |
| Cow position: | chr6:12623236-12623346 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 554-667 |
| Cow position: | chr6:12927885-12927998 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 90 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 554-667 |
| Cow position: | chr6:16492155-16492042 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 94 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 554-667 |
| Cow position: | chr6:21311993-21311880 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 554-667 |
| Cow position: | chr6:21587656-21587543 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 87, 80 |
| Conread position: | 554-667 |
| Cow position: | chr6:23695763-23695875 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 95 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 554-667 |
| Cow position: | chr6:39358574-39358463 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 554-667 |
| Cow position: | chr6:40713734-40713624 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 50, 31 |
| Conread position: | 554-667 |
| Cow position: | chr6:42961602-42961489 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 96 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 554-667 |
| Cow position: | chr6:53178405-53178515 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 554-667 |
| Cow position: | chr6:59597422-59597535 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 94 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 554-667 |
| Cow position: | chr6:60673313-60673424 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 554-667 |
| Cow position: | chr6:61515432-61515320 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 90 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 554-667 |
| Cow position: | chr6:61575369-61575481 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 554-667 |
| Cow position: | chr6:65870789-65870902 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 91 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 554-668 |
| Cow position: | chr6:21004421-21004535 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 97 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 50, 29 |
| Conread position: | 554-669 |
| Cow position: | chr6:5095789-5095670 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 554-669 |
| Cow position: | chr6:13040217-13040333 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 554-669 |
| Cow position: | chr6:14696607-14696492 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 95 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 554-671 |
| Cow position: | chr6:607027-607144 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 92 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 554-671 |
| Cow position: | chr6:2607378-2607495 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 554-671 |
| Cow position: | chr6:9375609-9375492 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 554-671 |
| Cow position: | chr6:10176536-10176421 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 554-671 |
| Cow position: | chr6:11829931-11830048 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 59, 66 |
| Conread position: | 554-671 |
| Cow position: | chr6:12500622-12500742 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 554-671 |
| Cow position: | chr6:15242601-15242714 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 554-671 |
| Cow position: | chr6:19329992-19329872 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 554-671 |
| Cow position: | chr6:28482780-28482897 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 554-671 |
| Cow position: | chr6:47540291-47540409 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 554-671 |
| Cow position: | chr6:60274458-60274342 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 554-671 |
| Cow position: | chr6:60859541-60859424 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 554-671 |
| Cow position: | chr6:65676022-65676139 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 98 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 554-671 |
| Cow position: | chr6:65711592-65711709 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 98 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 554-672 |
| Cow position: | chr6:1770430-1770316 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 554-672 |
| Cow position: | chr6:3591888-3592006 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 554-672 |
| Cow position: | chr6:3719243-3719123 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 554-672 |
| Cow position: | chr6:6343191-6343309 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 554-672 |
| Cow position: | chr6:9733066-9732951 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 554-672 |
| Cow position: | chr6:10605450-10605568 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 554-672 |
| Cow position: | chr6:12845082-12845199 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 116, 40 |
| Conread position: | 554-672 |
| Cow position: | chr6:16410961-16411078 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 554-672 |
| Cow position: | chr6:16706772-16706889 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 84, 80 |
| Conread position: | 554-672 |
| Cow position: | chr6:16737786-16737903 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 554-672 |
| Cow position: | chr6:17068054-17067937 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 554-672 |
| Cow position: | chr6:18987982-18988099 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 554-672 |
| Cow position: | chr6:24652415-24652299 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 54, 14 |
| Conread position: | 554-672 |
| Cow position: | chr6:27851939-27851822 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 554-672 |
| Cow position: | chr6:29077492-29077612 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 554-672 |
| Cow position: | chr6:37634555-37634672 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 554-672 |
| Cow position: | chr6:42565451-42565568 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 554-672 |
| Cow position: | chr6:48281760-48281879 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 554-672 |
| Cow position: | chr6:50120023-50119904 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 554-672 |
| Cow position: | chr6:54369134-54369017 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 554-672 |
| Cow position: | chr6:58075990-58076107 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 554-672 |
| Cow position: | chr6:69500095-69500207 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 555-660 |
| Cow position: | chr6:12337751-12337855 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 90 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 555-660 |
| Cow position: | chr6:66363478-66363373 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 83, 79 |
| Conread position: | 555-663 |
| Cow position: | chr6:8804762-8804654 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 89 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 13, 47 |
| Conread position: | 555-667 |
| Cow position: | chr6:26837620-26837511 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 555-667 |
| Cow position: | chr6:38853892-38853780 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 555-669 |
| Cow position: | chr6:21534825-21534939 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 555-669 |
| Cow position: | chr6:39994695-39994581 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 6, 10 |
| Conread position: | 555-672 |
| Cow position: | chr6:14063892-14063777 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 83, 46 |
| Conread position: | 555-672 |
| Cow position: | chr6:25407630-25407509 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 556-671 |
| Cow position: | chr6:40031961-40032071 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 556-672 |
| Cow position: | chr6:53401138-53401253 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 114, 8 |
| Conread position: | 556-672 |
| Cow position: | chr6:54885146-54885030 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 557-650 |
| Cow position: | chr6:61269098-61269191 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 80 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 557-654 |
| Cow position: | chr6:60017836-60017934 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 83 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 557-667 |
| Cow position: | chr6:29210270-29210382 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 96, 27 |
| Conread position: | 557-671 |
| Cow position: | chr6:32024570-32024456 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 558-664 |
| Cow position: | chr6:32121680-32121787 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 88 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 558-669 |
| Cow position: | chr6:52478658-52478547 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 93 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 558-672 |
| Cow position: | chr6:13688042-13687928 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 560-667 |
| Cow position: | chr6:130393-130287 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 91 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 560-667 |
| Cow position: | chr6:61631848-61631735 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 560-669 |
| Cow position: | chr6:5673000-5673109 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 560-671 |
| Cow position: | chr6:40264426-40264315 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 92 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 560-672 |
| Cow position: | chr6:56502080-56502192 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 561-665 |
| Cow position: | chr6:16103430-16103326 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 561-666 |
| Cow position: | chr6:6671409-6671514 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 85 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 561-668 |
| Cow position: | chr6:65862458-65862565 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 88 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 561-671 |
| Cow position: | chr6:14201470-14201580 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 561-671 |
| Cow position: | chr6:60350527-60350417 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 561-672 |
| Cow position: | chr6:44078294-44078404 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 90 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 561-672 |
| Cow position: | chr6:50746753-50746863 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 77, 69 |
| Conread position: | 561-672 |
| Cow position: | chr6:67950731-67950842 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 90 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 562-667 |
| Cow position: | chr6:51581486-51581379 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 88 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 562-669 |
| Cow position: | chr6:10106223-10106116 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 89 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 562-669 |
| Cow position: | chr6:54490967-54490860 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 86 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 563-660 |
| Cow position: | chr6:7131097-7131000 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 83 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 564-663 |
| Cow position: | chr6:54140589-54140687 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 84 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 564-667 |
| Cow position: | chr6:21542095-21542198 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 84 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 564-669 |
| Cow position: | chr6:51674693-51674798 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 74, 70 |
| Conread position: | 564-671 |
| Cow position: | chr6:20605709-20605815 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 88 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 565-660 |
| Cow position: | chr6:51398577-51398672 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 81 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 565-663 |
| Cow position: | chr6:59302048-59301951 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 565-671 |
| Cow position: | chr6:24902365-24902260 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 87 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 565-672 |
| Cow position: | chr6:388947-389053 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 92 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 567-672 |
| Cow position: | chr6:9008833-9008728 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 92 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 568-667 |
| Cow position: | chr6:23248184-23248085 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 85 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 568-672 |
| Cow position: | chr6:7539352-7539457 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 87 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 569-671 |
| Cow position: | chr6:7694573-7694473 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 569-672 |
| Cow position: | chr6:21110749-21110853 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 570-671 |
| Cow position: | chr6:14949700-14949599 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 85 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 570-671 |
| Cow position: | chr6:36470782-36470681 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 17, 24 |
| Conread position: | 570-672 |
| Cow position: | chr6:6117768-6117666 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 84 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 574-660 |
| Cow position: | chr6:53460786-53460701 (view UCSC Genome Browser custom track) |
| Alignm length: | 87 |
| Alignm identity: | 77 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
Show alignments to all cow chromosomes.