Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8019M10.3 |
| Conread position: | 655-845 |
| Cow position: | chr12:40445365-40445177 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 50, 13 |
| Conread position: | 660-845 |
| Cow position: | chr12:37798043-37797857 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 45, 8 |
| Conread position: | 660-888 |
| Cow position: | chr12:11089715-11089492 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 131, 9 |
| Conread position: | 663-876 |
| Cow position: | chr12:13622324-13622117 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 52, 44 |
| Conread position: | 667-888 |
| Cow position: | chr12:18002810-18003030 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 38, 27 |
| Conread position: | 669-808 |
| Cow position: | chr12:28259259-28259402 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 36, 132 |
| Conread position: | 669-875 |
| Cow position: | chr12:35360706-35360499 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 36, 5 |
| Conread position: | 669-881 |
| Cow position: | chr12:8479267-8479484 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 669-888 |
| Cow position: | chr12:11052901-11053124 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 11, 126 |
| Conread position: | 671-834 |
| Cow position: | chr12:11928121-11928282 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 45, 27 |
| Conread position: | 671-839 |
| Cow position: | chr12:14745285-14745452 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 34, 15 |
| Conread position: | 671-888 |
| Cow position: | chr12:40284485-40284265 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 34, 122 |
| Conread position: | 674-794 |
| Cow position: | chr12:37769501-37769622 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 674-817 |
| Cow position: | chr12:17421825-17421682 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 31, 118 |
| Conread position: | 674-888 |
| Cow position: | chr12:22130394-22130607 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 144, 35 |
| Conread position: | 679-837 |
| Cow position: | chr12:34435782-34435622 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 40, 113 |
| Conread position: | 679-853 |
| Cow position: | chr12:40180501-40180678 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 42, 119 |
| Conread position: | 725-888 |
| Cow position: | chr12:31028862-31029023 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 25, 72 |
Show alignments to all cow chromosomes.