Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8019M10.3 |
| Conread position: | 662-886 |
| Cow position: | chr16:24759921-24759701 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 42, 12 |
| Conread position: | 668-886 |
| Cow position: | chr16:46439954-46440170 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 43, 30 |
| Conread position: | 669-825 |
| Cow position: | chr16:41531638-41531479 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 41, 124 |
| Conread position: | 670-848 |
| Cow position: | chr16:27586287-27586464 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 35, 122 |
| Conread position: | 671-829 |
| Cow position: | chr16:46693705-46693862 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 32, 121 |
| Conread position: | 671-838 |
| Cow position: | chr16:20281913-20282080 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 34, 43 |
| Conread position: | 671-845 |
| Cow position: | chr16:22824261-22824437 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 27, 121 |
| Conread position: | 671-880 |
| Cow position: | chr16:45305648-45305861 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 34, 129 |
| Conread position: | 671-888 |
| Cow position: | chr16:14363306-14363085 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 13, 189 |
| Conread position: | 671-888 |
| Cow position: | chr16:17295087-17294868 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 34, 121 |
| Conread position: | 671-888 |
| Cow position: | chr16:38527132-38527353 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 34, 151 |
| Conread position: | 674-881 |
| Cow position: | chr16:21695624-21695419 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 13, 108 |
| Conread position: | 674-888 |
| Cow position: | chr16:22375641-22375852 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 31, 119 |
| Conread position: | 674-888 |
| Cow position: | chr16:29357160-29357375 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 31, 119 |
| Conread position: | 675-888 |
| Cow position: | chr16:16714825-16715043 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 21, 127 |
| Conread position: | 678-888 |
| Cow position: | chr16:37421224-37421437 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 37, 119 |
| Conread position: | 678-888 |
| Cow position: | chr16:41201895-41202102 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 27, 53 |
| Conread position: | 679-884 |
| Cow position: | chr16:15993299-15993089 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 27, 119 |
| Conread position: | 682-888 |
| Cow position: | chr16:3089581-3089784 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 17, 102 |
| Conread position: | 688-884 |
| Cow position: | chr16:34211697-34211501 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 17, 169 |
| Conread position: | 688-888 |
| Cow position: | chr16:11080806-11080604 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 17, 160 |
| Conread position: | 688-888 |
| Cow position: | chr16:15945538-15945740 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 17, 105 |
| Conread position: | 705-877 |
| Cow position: | chr16:48448082-48448256 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 16, 87 |
| Conread position: | 707-884 |
| Cow position: | chr16:17873760-17873937 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 10, 85 |
| Conread position: | 709-888 |
| Cow position: | chr16:10625214-10625402 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 7, 88 |
| Conread position: | 718-884 |
| Cow position: | chr16:16140130-16140296 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 97, 73 |
Show alignments to all cow chromosomes.