Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8019M10.3
        

               Conread position:
               659-888
               

               Cow position:
               chr17:30142757-30142989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               661-858
               

               Cow position:
               chr17:29561699-29561501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               671-837
               

               Cow position:
               chr17:29636639-29636808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               34, 122
               

               Conread position:
               671-888
               

               Cow position:
               chr17:29830505-29830287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               34, 126
               

               Conread position:
               674-852
               

               Cow position:
               chr17:14659892-14659707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               31, 126
               

               Conread position:
               674-877
               

               Cow position:
               chr17:30752888-30753096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               674-888
               

               Cow position:
               chr17:43468090-43467876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               31, 59
               

               Conread position:
               678-884
               

               Cow position:
               chr17:7814346-7814143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               41, 113
               

               Conread position:
               678-888
               

               Cow position:
               chr17:21215470-21215679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               25, 97
               

               Conread position:
               680-877
               

               Cow position:
               chr17:39445403-39445609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               705-888
               

               Cow position:
               chr17:18628356-18628170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               11, 92
               

               Conread position:
               710-888
               

               Cow position:
               chr17:30795154-30794977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               106, 81
               
Show alignments to all cow chromosomes.