Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8019M10.3 |
| Conread position: | 651-884 |
| Cow position: | chr21:788422-788648 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 78, 23 |
| Conread position: | 658-888 |
| Cow position: | chr21:3605527-3605307 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 46, 30 |
| Conread position: | 664-884 |
| Cow position: | chr21:20547997-20547771 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 667-846 |
| Cow position: | chr21:13664264-13664445 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 37, 125 |
| Conread position: | 669-826 |
| Cow position: | chr21:22006034-22005876 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 36, 77 |
| Conread position: | 669-829 |
| Cow position: | chr21:9399528-9399368 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 36, 28 |
| Conread position: | 669-870 |
| Cow position: | chr21:47930595-47930394 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 44, 124 |
| Conread position: | 669-888 |
| Cow position: | chr21:23827067-23827289 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 46, 114 |
| Conread position: | 670-881 |
| Cow position: | chr21:47253962-47253754 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 145, 29 |
| Conread position: | 671-888 |
| Cow position: | chr21:4469259-4469038 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 16, 122 |
| Conread position: | 671-888 |
| Cow position: | chr21:6964329-6964112 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 35, 119 |
| Conread position: | 671-888 |
| Cow position: | chr21:22370374-22370598 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 33, 111 |
| Conread position: | 671-888 |
| Cow position: | chr21:23190345-23190124 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 33, 121 |
| Conread position: | 671-888 |
| Cow position: | chr21:31707250-31707031 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 34, 134 |
| Conread position: | 674-876 |
| Cow position: | chr21:353729-353928 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 31, 96 |
| Conread position: | 675-875 |
| Cow position: | chr21:26146137-26145935 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 140, 116 |
| Conread position: | 678-884 |
| Cow position: | chr21:31758940-31758729 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 27, 119 |
| Conread position: | 684-881 |
| Cow position: | chr21:29634763-29634566 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 9, 88 |
| Conread position: | 686-871 |
| Cow position: | chr21:24144984-24144799 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 19, 111 |
| Conread position: | 688-877 |
| Cow position: | chr21:47332335-47332147 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 18, 104 |
| Conread position: | 688-880 |
| Cow position: | chr21:48314458-48314647 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 17, 72 |
| Conread position: | 690-888 |
| Cow position: | chr21:14726401-14726194 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 15, 102 |
| Conread position: | 706-888 |
| Cow position: | chr21:18052152-18052335 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 139, 85 |
| Conread position: | 710-888 |
| Cow position: | chr21:77712-77891 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 9, 81 |
Show alignments to all cow chromosomes.