Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8019M10.3
        

               Conread position:
               652-888
               

               Cow position:
               chr29:33577178-33577412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               52, 15
               

               Conread position:
               669-880
               

               Cow position:
               chr29:33584136-33584348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               36, 129
               

               Conread position:
               675-852
               

               Cow position:
               chr29:41365774-41365954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               30, 123
               

               Conread position:
               675-874
               

               Cow position:
               chr29:37306910-37307112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               30, 146
               

               Conread position:
               675-875
               

               Cow position:
               chr29:19596140-19596341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               675-887
               

               Cow position:
               chr29:34449933-34450144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               30, 94
               

               Conread position:
               678-884
               

               Cow position:
               chr29:18266725-18266519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               27, 113
               

               Conread position:
               688-881
               

               Cow position:
               chr29:39576473-39576658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               16, 34
               

               Conread position:
               694-888
               

               Cow position:
               chr29:31960607-31960413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               16, 50
               

               Conread position:
               695-880
               

               Cow position:
               chr29:25699179-25698996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               10, 102
               

               Conread position:
               695-884
               

               Cow position:
               chr29:11601352-11601538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               10, 144
               
Show alignments to all cow chromosomes.