Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8023H12.5 |
| Conread position: | 73-302 |
| Cow position: | chr10:61878179-61878409 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 41, 29 |
| Conread position: | 85-429 |
| Cow position: | chr10:62602418-62602071 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 33, 21 |
| Conread position: | 103-317 |
| Cow position: | chr10:45457372-45457583 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 159, 150 |
| Conread position: | 103-321 |
| Cow position: | chr10:38216925-38216708 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 8, 117 |
| Conread position: | 110-302 |
| Cow position: | chr10:63739167-63739358 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 152, 117 |
| Conread position: | 111-429 |
| Cow position: | chr10:49716971-49717278 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 216 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 254, 114 |
| Conread position: | 112-260 |
| Cow position: | chr10:60043662-60043517 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 112-296 |
| Cow position: | chr10:49991978-49992155 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 21, 34 |
| Conread position: | 112-333 |
| Cow position: | chr10:63382964-63382745 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 36, 127 |
| Conread position: | 112-430 |
| Cow position: | chr10:15411465-15411150 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 214 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 133, 91 |
| Conread position: | 114-366 |
| Cow position: | chr10:21031052-21031300 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 131, 106 |
| Conread position: | 115-312 |
| Cow position: | chr10:66131234-66131429 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 123, 139 |
| Conread position: | 115-375 |
| Cow position: | chr10:18576976-18576717 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 124, 140 |
| Conread position: | 115-377 |
| Cow position: | chr10:60871940-60871677 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 147, 187 |
| Conread position: | 115-429 |
| Cow position: | chr10:56667771-56668078 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 88, 35 |
| Conread position: | 116-291 |
| Cow position: | chr10:27429076-27429252 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 129, 140 |
| Conread position: | 116-338 |
| Cow position: | chr10:55274365-55274145 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 146, 156 |
| Conread position: | 120-341 |
| Cow position: | chr10:45340384-45340167 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 142, 76 |
| Conread position: | 121-361 |
| Cow position: | chr10:35087992-35088222 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 124, 132 |
| Conread position: | 122-429 |
| Cow position: | chr10:55372023-55371725 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 140, 72 |
| Conread position: | 126-324 |
| Cow position: | chr10:38465452-38465254 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 113, 182 |
| Conread position: | 128-287 |
| Cow position: | chr10:68095379-68095221 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 107, 130 |
| Conread position: | 129-316 |
| Cow position: | chr10:47663730-47663917 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 133, 123 |
| Conread position: | 130-307 |
| Cow position: | chr10:316274-316451 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 114, 126 |
| Conread position: | 140-429 |
| Cow position: | chr10:68317623-68317344 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 200 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 27, 17 |
| Conread position: | 144-305 |
| Cow position: | chr10:17121853-17121690 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 153-429 |
| Cow position: | chr10:24671502-24671229 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 197 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 92, 5 |
Show alignments to all cow chromosomes.