Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8023H12.5 |
| Conread position: | 109-299 |
| Cow position: | chr12:14372153-14372345 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 111-291 |
| Cow position: | chr12:10506514-10506332 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 63, 10 |
| Conread position: | 111-292 |
| Cow position: | chr12:17018695-17018514 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 134, 105 |
| Conread position: | 111-347 |
| Cow position: | chr12:28087811-28087578 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 134, 142 |
| Conread position: | 112-290 |
| Cow position: | chr12:22252373-22252548 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 149, 29 |
| Conread position: | 112-299 |
| Cow position: | chr12:3891745-3891929 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 84, 55 |
| Conread position: | 112-379 |
| Cow position: | chr12:6652227-6651962 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 109, 69 |
| Conread position: | 115-305 |
| Cow position: | chr12:37844880-37844690 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 130, 23 |
| Conread position: | 115-378 |
| Cow position: | chr12:12022135-12022389 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 137, 23 |
| Conread position: | 116-336 |
| Cow position: | chr12:5856954-5856738 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 147, 58 |
| Conread position: | 116-337 |
| Cow position: | chr12:38897543-38897765 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 126, 189 |
| Conread position: | 116-429 |
| Cow position: | chr12:14223612-14223918 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 210 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 146, 59 |
| Conread position: | 117-290 |
| Cow position: | chr12:38196061-38195888 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 145, 115 |
| Conread position: | 121-307 |
| Cow position: | chr12:15523853-15523668 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 124, 116 |
| Conread position: | 121-322 |
| Cow position: | chr12:29817812-29817611 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 124, 180 |
| Conread position: | 121-417 |
| Cow position: | chr12:9573615-9573320 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 204 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 100, 132 |
| Conread position: | 128-293 |
| Cow position: | chr12:31527063-31526897 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 34, 29 |
| Conread position: | 128-307 |
| Cow position: | chr12:27815314-27815136 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 173, 0 |
| Conread position: | 128-427 |
| Cow position: | chr12:30958563-30958258 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 203 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 117, 275 |
| Conread position: | 142-340 |
| Cow position: | chr12:38554134-38554329 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 119, 89 |
Show alignments to all cow chromosomes.