Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8023H12.5
        

               Conread position:
               108-256
               

               Cow position:
               chr22:27159981-27160129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               131, 27
               

               Conread position:
               111-292
               

               Cow position:
               chr22:20903847-20903668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               161, 76
               

               Conread position:
               111-299
               

               Cow position:
               chr22:12640279-12640096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               111-429
               

               Cow position:
               chr22:32510289-32510600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               213
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               182, 62
               

               Conread position:
               114-250
               

               Cow position:
               chr22:14494694-14494831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               114-299
               

               Cow position:
               chr22:43561418-43561234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               114-430
               

               Cow position:
               chr22:27505948-27505641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               204
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               246, 123
               

               Conread position:
               126-353
               

               Cow position:
               chr22:25739272-25739054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               136, 106
               

               Conread position:
               127-305
               

               Cow position:
               chr22:26066565-26066392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               138, 104
               

               Conread position:
               127-372
               

               Cow position:
               chr22:32476071-32475832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               136, 60
               

               Conread position:
               141-370
               

               Cow position:
               chr22:35610904-35610677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               98, 103
               

               Conread position:
               141-372
               

               Cow position:
               chr22:25815619-25815855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               121, 162
               
Show alignments to all cow chromosomes.