Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8023H12.5
        

               Conread position:
               109-343
               

               Cow position:
               chr29:26113992-26114227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               95, 194
               

               Conread position:
               109-377
               

               Cow position:
               chr29:20492389-20492669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               119, 150
               

               Conread position:
               110-291
               

               Cow position:
               chr29:19765822-19765640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               118, 11
               

               Conread position:
               111-299
               

               Cow position:
               chr29:379440-379253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               147, 110
               

               Conread position:
               113-287
               

               Cow position:
               chr29:12592962-12592786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               115-290
               

               Cow position:
               chr29:25968476-25968650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               130, 97
               

               Conread position:
               115-315
               

               Cow position:
               chr29:438640-438442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               130, 75
               

               Conread position:
               121-288
               

               Cow position:
               chr29:37704086-37703913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               56, 137
               

               Conread position:
               122-427
               

               Cow position:
               chr29:19213823-19214126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               202
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               123, 172
               

               Conread position:
               123-342
               

               Cow position:
               chr29:17374287-17374505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               122, 130
               

               Conread position:
               124-299
               

               Cow position:
               chr29:30568711-30568885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               114, 54
               

               Conread position:
               126-320
               

               Cow position:
               chr29:14077439-14077246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               53, 128
               
Show alignments to all cow chromosomes.