Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8023H12.5 |
| Conread position: | 86-315 |
| Cow position: | chrX:25833956-25834185 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 153, 12 |
| Conread position: | 111-300 |
| Cow position: | chrX:37176466-37176278 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 122, 30 |
| Conread position: | 112-268 |
| Cow position: | chrX:26580849-26580693 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 150, 45 |
| Conread position: | 112-297 |
| Cow position: | chrX:4606678-4606864 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 91, 145 |
| Conread position: | 112-305 |
| Cow position: | chrX:31286653-31286458 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 133, 141 |
| Conread position: | 112-366 |
| Cow position: | chrX:15498321-15498071 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 142, 135 |
| Conread position: | 112-380 |
| Cow position: | chrX:5877530-5877249 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 134, 45 |
| Conread position: | 112-430 |
| Cow position: | chrX:29712402-29712089 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 133, 45 |
| Conread position: | 113-429 |
| Cow position: | chrX:2173947-2174260 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 132, 68 |
| Conread position: | 114-291 |
| Cow position: | chrX:33980686-33980509 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 148, 73 |
| Conread position: | 114-297 |
| Cow position: | chrX:36102001-36102185 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 90, 67 |
| Conread position: | 114-307 |
| Cow position: | chrX:30465372-30465178 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 140, 123 |
| Conread position: | 114-429 |
| Cow position: | chrX:27719835-27720148 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 148, 53 |
| Conread position: | 120-307 |
| Cow position: | chrX:30268160-30268349 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 124, 184 |
| Conread position: | 121-285 |
| Cow position: | chrX:22375979-22376143 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 124, 141 |
| Conread position: | 127-293 |
| Cow position: | chrX:23897426-23897260 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 118, 63 |
| Conread position: | 127-297 |
| Cow position: | chrX:34051073-34050903 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 76, 50 |
| Conread position: | 128-290 |
| Cow position: | chrX:25464551-25464710 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 117, 19 |
| Conread position: | 129-429 |
| Cow position: | chrX:37379565-37379854 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 116, 21 |
| Conread position: | 130-366 |
| Cow position: | chrX:11972448-11972675 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 115, 44 |
| Conread position: | 131-334 |
| Cow position: | chrX:11376338-11376535 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 21, 6 |
| Conread position: | 138-335 |
| Cow position: | chrX:32864916-32865110 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 62, 91 |
| Conread position: | 157-377 |
| Cow position: | chrX:32917022-32916802 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 88, 28 |
Show alignments to all cow chromosomes.