Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8023P08.3 |
| Conread position: | 523-845 |
| Cow position: | chr12:20636348-20636019 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 211 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 44, 99 |
| Conread position: | 526-846 |
| Cow position: | chr12:37770691-37770998 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 235 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 73, 9 |
| Conread position: | 527-782 |
| Cow position: | chr12:30170484-30170737 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 72, 7 |
| Conread position: | 527-837 |
| Cow position: | chr12:41159407-41159713 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 38, 51 |
| Conread position: | 527-862 |
| Cow position: | chr12:8943404-8943067 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 41, 73 |
| Conread position: | 527-862 |
| Cow position: | chr12:18518479-18518820 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 70 |
| Conread position: | 527-862 |
| Cow position: | chr12:42879511-42879847 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 8 |
| Conread position: | 530-806 |
| Cow position: | chr12:45820541-45820275 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 238, 50 |
| Conread position: | 530-808 |
| Cow position: | chr12:32714862-32715141 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 68, 155 |
| Conread position: | 530-822 |
| Cow position: | chr12:27037627-27037343 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 199 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 530-854 |
| Cow position: | chr12:31947936-31948252 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 68, 103 |
| Conread position: | 530-860 |
| Cow position: | chr12:42966818-42967141 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 69, 33 |
| Conread position: | 530-862 |
| Cow position: | chr12:1889762-1889432 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 73, 153 |
| Conread position: | 530-862 |
| Cow position: | chr12:11587585-11587917 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 234 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 29, 90 |
| Conread position: | 530-862 |
| Cow position: | chr12:30805672-30806000 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 230 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 69, 115 |
| Conread position: | 530-862 |
| Cow position: | chr12:33976019-33976351 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 69, 41 |
| Conread position: | 531-843 |
| Cow position: | chr12:11056699-11057000 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 68, 50 |
| Conread position: | 531-843 |
| Cow position: | chr12:33323676-33323365 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 71, 108 |
| Conread position: | 531-862 |
| Cow position: | chr12:19502597-19502266 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 228, 64 |
| Conread position: | 533-707 |
| Cow position: | chr12:26317284-26317459 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 533-711 |
| Cow position: | chr12:8710647-8710819 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 66, 90 |
| Conread position: | 533-718 |
| Cow position: | chr12:3579105-3579291 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 66, 117 |
| Conread position: | 533-738 |
| Cow position: | chr12:15530879-15531083 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 66, 105 |
| Conread position: | 533-746 |
| Cow position: | chr12:13156499-13156701 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 66, 77 |
| Conread position: | 533-750 |
| Cow position: | chr12:8869056-8868845 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 66, 167 |
| Conread position: | 533-753 |
| Cow position: | chr12:29969401-29969619 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 30, 43 |
| Conread position: | 533-784 |
| Cow position: | chr12:19869290-19869531 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 66, 113 |
| Conread position: | 533-788 |
| Cow position: | chr12:39465403-39465654 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 119, 66 |
| Conread position: | 533-790 |
| Cow position: | chr12:17001083-17001335 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 66, 107 |
| Conread position: | 533-790 |
| Cow position: | chr12:31429749-31429495 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 66, 160 |
| Conread position: | 533-791 |
| Cow position: | chr12:19691413-19691156 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 66, 182 |
| Conread position: | 533-796 |
| Cow position: | chr12:6720144-6720408 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 66, 132 |
| Conread position: | 533-796 |
| Cow position: | chr12:30605331-30605083 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 533-797 |
| Cow position: | chr12:33457966-33458230 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 66, 101 |
| Conread position: | 533-802 |
| Cow position: | chr12:5905878-5906142 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 66, 9 |
| Conread position: | 533-808 |
| Cow position: | chr12:7000784-7000512 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 28, 113 |
| Conread position: | 533-808 |
| Cow position: | chr12:18020679-18020952 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 66, 22 |
| Conread position: | 533-808 |
| Cow position: | chr12:29770752-29770486 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 201 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 66, 97 |
| Conread position: | 533-808 |
| Cow position: | chr12:34148528-34148265 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 64, 86 |
| Conread position: | 533-837 |
| Cow position: | chr12:30662128-30661826 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 22, 98 |
| Conread position: | 533-837 |
| Cow position: | chr12:43942298-43942595 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 105, 59 |
| Conread position: | 533-840 |
| Cow position: | chr12:42167470-42167757 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 66, 11 |
| Conread position: | 533-842 |
| Cow position: | chr12:45965431-45965137 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 91, 69 |
| Conread position: | 533-845 |
| Cow position: | chr12:11836054-11836361 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 203 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 66, 58 |
| Conread position: | 533-845 |
| Cow position: | chr12:15429774-15429463 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 226, 72 |
| Conread position: | 533-851 |
| Cow position: | chr12:42685126-42684802 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 222 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 533-852 |
| Cow position: | chr12:25917442-25917138 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 165, 63 |
| Conread position: | 533-859 |
| Cow position: | chr12:7299647-7299315 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 32, 124 |
| Conread position: | 533-861 |
| Cow position: | chr12:9482477-9482155 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 162, 23 |
| Conread position: | 533-861 |
| Cow position: | chr12:17881683-17882002 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 222 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 51, 92 |
| Conread position: | 533-862 |
| Cow position: | chr12:5635626-5635304 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 66, 90 |
| Conread position: | 533-862 |
| Cow position: | chr12:6241134-6241472 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 66, 34 |
| Conread position: | 533-862 |
| Cow position: | chr12:9143218-9143532 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 234 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 265, 50 |
| Conread position: | 533-862 |
| Cow position: | chr12:17031436-17031756 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 232 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 66, 122 |
| Conread position: | 533-862 |
| Cow position: | chr12:18123507-18123814 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 229 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 533-862 |
| Cow position: | chr12:18421102-18420773 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 102, 64 |
| Conread position: | 533-862 |
| Cow position: | chr12:19508747-19508416 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 32, 229 |
| Conread position: | 533-862 |
| Cow position: | chr12:22515915-22515590 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 215 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 32, 18 |
| Conread position: | 533-862 |
| Cow position: | chr12:23574591-23574918 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 239, 22 |
| Conread position: | 533-862 |
| Cow position: | chr12:25561193-25561514 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 233 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 69, 44 |
| Conread position: | 533-862 |
| Cow position: | chr12:27803225-27802910 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 121, 60 |
| Conread position: | 533-862 |
| Cow position: | chr12:30745537-30745864 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 56 |
| Conread position: | 533-862 |
| Cow position: | chr12:35368462-35368792 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 66, 115 |
| Conread position: | 533-862 |
| Cow position: | chr12:36501129-36500799 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 27, 75 |
| Conread position: | 533-862 |
| Cow position: | chr12:36544828-36544497 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 36 |
| Conread position: | 533-862 |
| Cow position: | chr12:38774419-38774097 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 33, 117 |
| Conread position: | 533-862 |
| Cow position: | chr12:39486254-39486577 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 235 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 237, 60 |
| Conread position: | 533-863 |
| Cow position: | chr12:12637367-12637036 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 21, 222 |
| Conread position: | 533-863 |
| Cow position: | chr12:33129089-33129403 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 533-864 |
| Cow position: | chr12:4768747-4769069 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 28, 67 |
| Conread position: | 533-864 |
| Cow position: | chr12:15089335-15089666 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 206 |
| Conread position: | 533-864 |
| Cow position: | chr12:18388461-18388137 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 235 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 164, 66 |
| Conread position: | 533-864 |
| Cow position: | chr12:42181316-42180978 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 66, 13 |
| Conread position: | 534-808 |
| Cow position: | chr12:2813048-2813323 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 189 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 41, 66 |
| Conread position: | 534-861 |
| Cow position: | chr12:18577668-18577974 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 226 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 212, 65 |
| Conread position: | 534-862 |
| Cow position: | chr12:15122142-15122473 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 124 |
| Conread position: | 534-862 |
| Cow position: | chr12:20777100-20776781 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 232 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 65, 22 |
| Conread position: | 534-862 |
| Cow position: | chr12:32169362-32169694 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 235 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 27, 77 |
| Conread position: | 534-862 |
| Cow position: | chr12:40910467-40910137 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 65, 90 |
| Conread position: | 534-862 |
| Cow position: | chr12:42602415-42602089 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 24, 64 |
| Conread position: | 534-863 |
| Cow position: | chr12:28748760-28749093 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 31, 10 |
| Conread position: | 535-807 |
| Cow position: | chr12:18766155-18765879 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 34, 25 |
| Conread position: | 535-812 |
| Cow position: | chr12:6210334-6210060 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 64, 55 |
| Conread position: | 535-858 |
| Cow position: | chr12:33851182-33851500 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 218 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 107, 160 |
| Conread position: | 535-861 |
| Cow position: | chr12:6410909-6410589 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 194, 64 |
| Conread position: | 535-861 |
| Cow position: | chr12:17080083-17080413 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 64, 75 |
| Conread position: | 535-862 |
| Cow position: | chr12:4719768-4720092 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 32, 84 |
| Conread position: | 535-862 |
| Cow position: | chr12:5714451-5714766 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 64, 202 |
| Conread position: | 535-862 |
| Cow position: | chr12:6242353-6242027 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 219 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 23, 111 |
| Conread position: | 536-862 |
| Cow position: | chr12:9710387-9710057 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 27, 42 |
| Conread position: | 536-862 |
| Cow position: | chr12:44622178-44622508 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 230 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 63, 115 |
| Conread position: | 536-864 |
| Cow position: | chr12:15703673-15703345 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 233 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 101, 62 |
| Conread position: | 539-745 |
| Cow position: | chr12:731110-730904 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 60, 128 |
| Conread position: | 539-778 |
| Cow position: | chr12:19507459-19507702 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 63, 32 |
| Conread position: | 539-793 |
| Cow position: | chr12:47803982-47804236 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 63, 23 |
| Conread position: | 539-807 |
| Cow position: | chr12:6485380-6485120 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 93, 51 |
| Conread position: | 539-840 |
| Cow position: | chr12:38053673-38053977 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 21, 57 |
| Conread position: | 539-854 |
| Cow position: | chr12:24662945-24663260 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 60, 9 |
| Conread position: | 539-862 |
| Cow position: | chr12:30210309-30210618 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 219 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 60, 87 |
| Conread position: | 539-863 |
| Cow position: | chr12:28131411-28131742 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 19, 85 |
| Conread position: | 540-862 |
| Cow position: | chr12:17879475-17879157 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 223 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 70, 57 |
| Conread position: | 541-691 |
| Cow position: | chr12:29411660-29411511 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 541-864 |
| Cow position: | chr12:3623523-3623841 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 26, 7 |
| Conread position: | 542-861 |
| Cow position: | chr12:31530118-31530445 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 16, 109 |
| Conread position: | 542-864 |
| Cow position: | chr12:13643066-13643385 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 15, 51 |
| Conread position: | 543-727 |
| Cow position: | chr12:6164194-6164008 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 543-793 |
| Cow position: | chr12:28582673-28582429 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 56, 102 |
| Conread position: | 543-854 |
| Cow position: | chr12:15415042-15414730 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 59, 77 |
| Conread position: | 544-862 |
| Cow position: | chr12:42784139-42784455 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 61, 244 |
| Conread position: | 545-853 |
| Cow position: | chr12:5632043-5631745 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 48 |
| Conread position: | 546-862 |
| Cow position: | chr12:15050784-15050477 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 11, 105 |
| Conread position: | 546-862 |
| Cow position: | chr12:35669639-35669324 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 53, 210 |
| Conread position: | 549-861 |
| Cow position: | chr12:36790974-36790666 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 205 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 56, 103 |
| Conread position: | 550-794 |
| Cow position: | chr12:41216046-41215805 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 49, 143 |
| Conread position: | 551-861 |
| Cow position: | chr12:37170104-37169802 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 71 |
| Conread position: | 554-859 |
| Cow position: | chr12:22285277-22284976 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 45, 99 |
| Conread position: | 554-862 |
| Cow position: | chr12:24032343-24032636 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 557-862 |
| Cow position: | chr12:7902955-7902657 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 210 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 138, 24 |
| Conread position: | 561-862 |
| Cow position: | chr12:26575734-26576040 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 18, 204 |
| Conread position: | 565-807 |
| Cow position: | chr12:46120977-46120739 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 34, 83 |
| Conread position: | 565-862 |
| Cow position: | chr12:27563524-27563231 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 34, 59 |
| Conread position: | 566-862 |
| Cow position: | chr12:9767020-9766733 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 87, 31 |
| Conread position: | 566-862 |
| Cow position: | chr12:16670119-16670414 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 206 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 40, 198 |
| Conread position: | 566-862 |
| Cow position: | chr12:19400956-19400668 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 66, 40 |
| Conread position: | 566-862 |
| Cow position: | chr12:26217972-26217679 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 33, 84 |
| Conread position: | 566-862 |
| Cow position: | chr12:35771165-35770876 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 36, 83 |
| Conread position: | 568-862 |
| Cow position: | chr12:7110056-7110356 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 31, 65 |
| Conread position: | 580-864 |
| Cow position: | chr12:24152205-24152492 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 22, 72 |
| Conread position: | 583-861 |
| Cow position: | chr12:10942156-10942441 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 584-862 |
| Cow position: | chr12:30590639-30590917 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 15, 62 |
| Conread position: | 585-766 |
| Cow position: | chr12:3092700-3092527 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 14, 63 |
| Conread position: | 585-861 |
| Cow position: | chr12:26777317-26777047 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 58, 25 |
| Conread position: | 585-862 |
| Cow position: | chr12:7884809-7884532 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 200 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 14, 78 |
| Conread position: | 585-864 |
| Cow position: | chr12:17269672-17269952 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 201 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 14, 201 |
| Conread position: | 588-859 |
| Cow position: | chr12:19261074-19261340 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 11, 27 |
| Conread position: | 601-860 |
| Cow position: | chr12:29358167-29357919 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 35, 64 |
| Conread position: | 601-861 |
| Cow position: | chr12:3371654-3371401 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 601-861 |
| Cow position: | chr12:18583103-18582852 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 618-862 |
| Cow position: | chr12:21780071-21780312 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 176, 30 |
| Conread position: | 621-862 |
| Cow position: | chr12:5554426-5554189 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 163, 0 |
| Conread position: | 629-862 |
| Cow position: | chr12:18514012-18513778 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 134, 49 |
| Conread position: | 630-788 |
| Cow position: | chr12:23644887-23644728 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 633-864 |
| Cow position: | chr12:5839738-5839511 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 20, 154 |
| Conread position: | 634-862 |
| Cow position: | chr12:17252277-17252055 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 637-861 |
| Cow position: | chr12:12232807-12233028 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 97, 79 |
| Conread position: | 645-862 |
| Cow position: | chr12:45092378-45092588 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 195, 139 |
| Conread position: | 646-809 |
| Cow position: | chr12:15260696-15260855 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 646-862 |
| Cow position: | chr12:36261622-36261842 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 660-862 |
| Cow position: | chr12:2734961-2734763 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 662-862 |
| Cow position: | chr12:33948853-33949048 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 663-862 |
| Cow position: | chr12:45039057-45039255 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 30, 94 |
| Conread position: | 666-864 |
| Cow position: | chr12:24437682-24437482 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 667-861 |
| Cow position: | chr12:23714628-23714819 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 6, 118 |
| Conread position: | 668-861 |
| Cow position: | chr12:14986704-14986894 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 91, 86 |
| Conread position: | 680-861 |
| Cow position: | chr12:6480607-6480789 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 79, 75 |
| Conread position: | 680-862 |
| Cow position: | chr12:2964017-2964194 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 680-862 |
| Cow position: | chr12:29180640-29180822 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 25, 108 |
| Conread position: | 680-862 |
| Cow position: | chr12:29316495-29316314 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 79, 145 |
| Conread position: | 680-862 |
| Cow position: | chr12:29731281-29731459 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 688-862 |
| Cow position: | chr12:4512475-4512303 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 73, 63 |
| Conread position: | 699-862 |
| Cow position: | chr12:38679035-38679196 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 68, 56 |
| Conread position: | 734-862 |
| Cow position: | chr12:38165520-38165393 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 52, 0 |
Show alignments to all cow chromosomes.