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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8023P08.3
        

               
Conread position:
               
520-856
               

               
Cow position:
               
chr19:25855058-25854709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
47, 255
               

               
Conread position:
               
527-781
               

               
Cow position:
               
chr19:43441007-43441260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 54
               

               
Conread position:
               
527-860
               

               
Cow position:
               
chr19:43431482-43431149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
7, 55
               

               
Conread position:
               
527-862
               

               
Cow position:
               
chr19:22043508-22043182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 8
               

               
Conread position:
               
528-862
               

               
Cow position:
               
chr19:13121430-13121111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
39, 17
               

               
Conread position:
               
530-761
               

               
Cow position:
               
chr19:47109884-47110116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
530-774
               

               
Cow position:
               
chr19:990574-990326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
69, 173
               

               
Conread position:
               
530-782
               

               
Cow position:
               
chr19:56382986-56383251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
69, 60
               

               
Conread position:
               
530-793
               

               
Cow position:
               
chr19:15863196-15862943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
196, 115
               

               
Conread position:
               
530-860
               

               
Cow position:
               
chr19:52456912-52456581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
79, 69
               

               
Conread position:
               
530-861
               

               
Cow position:
               
chr19:35107374-35107690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
69, 26
               

               
Conread position:
               
530-862
               

               
Cow position:
               
chr19:10213515-10213843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 121
               

               
Conread position:
               
530-862
               

               
Cow position:
               
chr19:24760039-24759712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 184
               

               
Conread position:
               
530-862
               

               
Cow position:
               
chr19:29368246-29368570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
530-862
               

               
Cow position:
               
chr19:38392647-38392983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 184
               

               
Conread position:
               
530-864
               

               
Cow position:
               
chr19:8864591-8864920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
38, 105
               

               
Conread position:
               
531-706
               

               
Cow position:
               
chr19:20693343-20693520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
531-753
               

               
Cow position:
               
chr19:52773332-52773105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
71, 58
               

               
Conread position:
               
531-774
               

               
Cow position:
               
chr19:6049820-6049588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
68, 90
               

               
Conread position:
               
531-803
               

               
Cow position:
               
chr19:14347858-14348128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
36, 161
               

               
Conread position:
               
533-692
               

               
Cow position:
               
chr19:36176596-36176755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
66, 101
               

               
Conread position:
               
533-724
               

               
Cow position:
               
chr19:4092358-4092551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
66, 32
               

               
Conread position:
               
533-729
               

               
Cow position:
               
chr19:37646987-37646793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
66, 13
               

               
Conread position:
               
533-738
               

               
Cow position:
               
chr19:33823165-33823371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
36, 102
               

               
Conread position:
               
533-750
               

               
Cow position:
               
chr19:42240443-42240231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
66, 119
               

               
Conread position:
               
533-754
               

               
Cow position:
               
chr19:2734299-2734518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
66, 117
               

               
Conread position:
               
533-782
               

               
Cow position:
               
chr19:21363591-21363341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
33, 67
               

               
Conread position:
               
533-789
               

               
Cow position:
               
chr19:16694196-16693929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
15, 30
               

               
Conread position:
               
533-792
               

               
Cow position:
               
chr19:10242434-10242681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
66, 87
               

               
Conread position:
               
533-794
               

               
Cow position:
               
chr19:33468872-33469129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
28, 109
               

               
Conread position:
               
533-797
               

               
Cow position:
               
chr19:36059784-36060047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
111, 12
               

               
Conread position:
               
533-801
               

               
Cow position:
               
chr19:25628285-25628016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
113, 65
               

               
Conread position:
               
533-801
               

               
Cow position:
               
chr19:34620182-34619916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
66, 204
               

               
Conread position:
               
533-802
               

               
Cow position:
               
chr19:9542045-9541787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
69, 107
               

               
Conread position:
               
533-802
               

               
Cow position:
               
chr19:14592902-14593171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
66, 254
               

               
Conread position:
               
533-804
               

               
Cow position:
               
chr19:8375457-8375182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
66, 183
               

               
Conread position:
               
533-804
               

               
Cow position:
               
chr19:22799231-22798960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
27, 94
               

               
Conread position:
               
533-808
               

               
Cow position:
               
chr19:7404532-7404253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
35, 224
               

               
Conread position:
               
533-808
               

               
Cow position:
               
chr19:17795745-17796016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
66, 165
               

               
Conread position:
               
533-823
               

               
Cow position:
               
chr19:25807454-25807172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
66, 181
               

               
Conread position:
               
533-837
               

               
Cow position:
               
chr19:23786041-23786326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
66, 121
               

               
Conread position:
               
533-838
               

               
Cow position:
               
chr19:7053484-7053192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
111, 50
               

               
Conread position:
               
533-845
               

               
Cow position:
               
chr19:10545857-10545548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
66, 35
               

               
Conread position:
               
533-848
               

               
Cow position:
               
chr19:1664342-1664022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
105, 44
               

               
Conread position:
               
533-849
               

               
Cow position:
               
chr19:27612320-27612016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
105, 13
               

               
Conread position:
               
533-852
               

               
Cow position:
               
chr19:32754370-32754694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
32, 218
               

               
Conread position:
               
533-854
               

               
Cow position:
               
chr19:24062140-24062441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
533-854
               

               
Cow position:
               
chr19:34287873-34288180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
66, 28
               

               
Conread position:
               
533-854
               

               
Cow position:
               
chr19:39057092-39057415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 91
               

               
Conread position:
               
533-854
               

               
Cow position:
               
chr19:50562523-50562850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
69, 193
               

               
Conread position:
               
533-858
               

               
Cow position:
               
chr19:34955845-34955542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 104
               

               
Conread position:
               
533-859
               

               
Cow position:
               
chr19:22765469-22765784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
66, 103
               

               
Conread position:
               
533-860
               

               
Cow position:
               
chr19:20661564-20661239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 161
               

               
Conread position:
               
533-861
               

               
Cow position:
               
chr19:3812163-3811848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
533-861
               

               
Cow position:
               
chr19:26057697-26057377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
154, 59
               

               
Conread position:
               
533-861
               

               
Cow position:
               
chr19:54942821-54943140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
51, 40
               

               
Conread position:
               
533-862
               

               
Cow position:
               
chr19:268202-268523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
65, 99
               

               
Conread position:
               
533-862
               

               
Cow position:
               
chr19:1968456-1968146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
69, 46
               

               
Conread position:
               
533-862
               

               
Cow position:
               
chr19:10080917-10081263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
25, 67
               

               
Conread position:
               
533-862
               

               
Cow position:
               
chr19:10186350-10186682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
66, 58
               

               
Conread position:
               
533-862
               

               
Cow position:
               
chr19:13129721-13130039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 182
               

               
Conread position:
               
533-862
               

               
Cow position:
               
chr19:14253486-14253810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
66, 96
               

               
Conread position:
               
533-862
               

               
Cow position:
               
chr19:15068154-15067834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
66, 76
               

               
Conread position:
               
533-862
               

               
Cow position:
               
chr19:15887474-15887141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
66, 57
               

               
Conread position:
               
533-862
               

               
Cow position:
               
chr19:16096702-16096378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
221, 59
               

               
Conread position:
               
533-862
               

               
Cow position:
               
chr19:20935602-20935928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
66, 118
               

               
Conread position:
               
533-862
               

               
Cow position:
               
chr19:25526133-25526454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
66, 27
               

               
Conread position:
               
533-862
               

               
Cow position:
               
chr19:25655386-25655069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
65, 231
               

               
Conread position:
               
533-862
               

               
Cow position:
               
chr19:25727030-25726710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
92, 66
               

               
Conread position:
               
533-862
               

               
Cow position:
               
chr19:26976211-26975896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
533-862
               

               
Cow position:
               
chr19:29625754-29626075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
533-862
               

               
Cow position:
               
chr19:33033593-33033269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
69, 121
               

               
Conread position:
               
533-862
               

               
Cow position:
               
chr19:33903574-33903251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 117
               

               
Conread position:
               
533-862
               

               
Cow position:
               
chr19:38500016-38500331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
66, 16
               

               
Conread position:
               
533-862
               

               
Cow position:
               
chr19:39751333-39751646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
187, 60
               

               
Conread position:
               
533-862
               

               
Cow position:
               
chr19:42694840-42695164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
66, 83
               

               
Conread position:
               
533-862
               

               
Cow position:
               
chr19:47453284-47453606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
533-862
               

               
Cow position:
               
chr19:47671598-47671909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
66, 105
               

               
Conread position:
               
533-862
               

               
Cow position:
               
chr19:48960243-48960568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 223
               

               
Conread position:
               
533-862
               

               
Cow position:
               
chr19:55952305-55951989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
66, 46
               

               
Conread position:
               
533-864
               

               
Cow position:
               
chr19:5185397-5185081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 118
               

               
Conread position:
               
533-864
               

               
Cow position:
               
chr19:15852796-15853103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
533-864
               

               
Cow position:
               
chr19:39576722-39576397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 252
               

               
Conread position:
               
533-864
               

               
Cow position:
               
chr19:44839064-44838763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
533-864
               

               
Cow position:
               
chr19:55590085-55590412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
99, 28
               

               
Conread position:
               
534-695
               

               
Cow position:
               
chr19:38723997-38723836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
68, 100
               

               
Conread position:
               
534-773
               

               
Cow position:
               
chr19:35742011-35742249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
65, 22
               

               
Conread position:
               
534-782
               

               
Cow position:
               
chr19:42903857-42904105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
65, 196
               

               
Conread position:
               
534-787
               

               
Cow position:
               
chr19:5656256-5656023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
68, 22
               

               
Conread position:
               
534-803
               

               
Cow position:
               
chr19:19919612-19919347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
65, 120
               

               
Conread position:
               
534-805
               

               
Cow position:
               
chr19:31846695-31846434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
31, 63
               

               
Conread position:
               
534-829
               

               
Cow position:
               
chr19:47859466-47859169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
33, 100
               

               
Conread position:
               
534-845
               

               
Cow position:
               
chr19:30232578-30232871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
256, 64
               

               
Conread position:
               
534-848
               

               
Cow position:
               
chr19:26753883-26754202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
23, 69
               

               
Conread position:
               
534-858
               

               
Cow position:
               
chr19:3216867-3217175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
65, 47
               

               
Conread position:
               
534-858
               

               
Cow position:
               
chr19:7637386-7637064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
68, 12
               

               
Conread position:
               
534-859
               

               
Cow position:
               
chr19:41946035-41946354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 105
               

               
Conread position:
               
534-860
               

               
Cow position:
               
chr19:36097072-36097397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
24, 112
               

               
Conread position:
               
534-861
               

               
Cow position:
               
chr19:18129409-18129734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 66
               

               
Conread position:
               
534-861
               

               
Cow position:
               
chr19:46094790-46094453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
534-862
               

               
Cow position:
               
chr19:11376556-11376246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
65, 167
               

               
Conread position:
               
534-862
               

               
Cow position:
               
chr19:21198986-21199325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 117
               

               
Conread position:
               
534-862
               

               
Cow position:
               
chr19:21378620-21378291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 76
               

               
Conread position:
               
534-862
               

               
Cow position:
               
chr19:24137111-24137440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
65, 98
               

               
Conread position:
               
534-862
               

               
Cow position:
               
chr19:35762403-35762080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 84
               

               
Conread position:
               
534-862
               

               
Cow position:
               
chr19:42563985-42564322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
23, 226
               

               
Conread position:
               
534-862
               

               
Cow position:
               
chr19:46454703-46455016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
534-862
               

               
Cow position:
               
chr19:52185920-52185582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
28, 43
               

               
Conread position:
               
534-863
               

               
Cow position:
               
chr19:41584824-41585148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
65, 105
               

               
Conread position:
               
534-864
               

               
Cow position:
               
chr19:43702856-43702510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
112, 51
               

               
Conread position:
               
534-864
               

               
Cow position:
               
chr19:50161847-50162172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
177, 27
               

               
Conread position:
               
535-788
               

               
Cow position:
               
chr19:24358379-24358141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
535-801
               

               
Cow position:
               
chr19:18786470-18786209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
68, 44
               

               
Conread position:
               
535-808
               

               
Cow position:
               
chr19:34001059-34001328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
535-827
               

               
Cow position:
               
chr19:16567008-16567292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
266, 41
               

               
Conread position:
               
535-854
               

               
Cow position:
               
chr19:54121129-54121432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
535-861
               

               
Cow position:
               
chr19:12601657-12601976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
37, 115
               

               
Conread position:
               
535-861
               

               
Cow position:
               
chr19:36221777-36222107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
23, 115
               

               
Conread position:
               
535-862
               

               
Cow position:
               
chr19:7668553-7668870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 18
               

               
Conread position:
               
535-862
               

               
Cow position:
               
chr19:41497780-41497467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
30, 91
               

               
Conread position:
               
535-862
               

               
Cow position:
               
chr19:55688849-55688519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
64, 74
               

               
Conread position:
               
535-864
               

               
Cow position:
               
chr19:20622503-20622834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
24, 71
               

               
Conread position:
               
536-674
               

               
Cow position:
               
chr19:30927671-30927808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
536-761
               

               
Cow position:
               
chr19:17479113-17478886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
98, 87
               

               
Conread position:
               
536-862
               

               
Cow position:
               
chr19:52158386-52158717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
61, 206
               

               
Conread position:
               
539-797
               

               
Cow position:
               
chr19:4503071-4503329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
60, 85
               

               
Conread position:
               
539-837
               

               
Cow position:
               
chr19:40051536-40051237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
58, 74
               

               
Conread position:
               
539-844
               

               
Cow position:
               
chr19:15719764-15719468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 81
               

               
Conread position:
               
539-861
               

               
Cow position:
               
chr19:3621285-3621603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 111
               

               
Conread position:
               
539-862
               

               
Cow position:
               
chr19:17972402-17972093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
539-862
               

               
Cow position:
               
chr19:24144875-24145196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
63, 99
               

               
Conread position:
               
540-809
               

               
Cow position:
               
chr19:39485174-39485440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
56, 100
               

               
Conread position:
               
540-861
               

               
Cow position:
               
chr19:6334012-6334305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
540-862
               

               
Cow position:
               
chr19:15092272-15091970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
112, 53
               

               
Conread position:
               
541-808
               

               
Cow position:
               
chr19:8033602-8033869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
61, 233
               

               
Conread position:
               
541-809
               

               
Cow position:
               
chr19:4800598-4800866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
26, 112
               

               
Conread position:
               
541-862
               

               
Cow position:
               
chr19:7158868-7158540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
24, 115
               

               
Conread position:
               
541-862
               

               
Cow position:
               
chr19:39254597-39254263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
15, 107
               

               
Conread position:
               
543-856
               

               
Cow position:
               
chr19:33912771-33912456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
14, 114
               

               
Conread position:
               
543-861
               

               
Cow position:
               
chr19:52750902-52750585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
14, 108
               

               
Conread position:
               
543-862
               

               
Cow position:
               
chr19:36138715-36139029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
15, 103
               

               
Conread position:
               
544-804
               

               
Cow position:
               
chr19:8332155-8332419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
54, 61
               

               
Conread position:
               
544-823
               

               
Cow position:
               
chr19:52734977-52735244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
545-860
               

               
Cow position:
               
chr19:39622942-39622611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
53, 186
               

               
Conread position:
               
546-862
               

               
Cow position:
               
chr19:16621491-16621183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 102
               

               
Conread position:
               
551-862
               

               
Cow position:
               
chr19:34758132-34757817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
37, 26
               

               
Conread position:
               
554-862
               

               
Cow position:
               
chr19:42517388-42517079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
555-861
               

               
Cow position:
               
chr19:23378557-23378851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
44, 82
               

               
Conread position:
               
563-863
               

               
Cow position:
               
chr19:24005545-24005829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
564-859
               

               
Cow position:
               
chr19:23394665-23394957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
35, 24
               

               
Conread position:
               
566-860
               

               
Cow position:
               
chr19:14632154-14631868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
33, 80
               

               
Conread position:
               
566-862
               

               
Cow position:
               
chr19:6278064-6278363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
36, 87
               

               
Conread position:
               
566-862
               

               
Cow position:
               
chr19:11110851-11110554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
34, 86
               

               
Conread position:
               
567-753
               

               
Cow position:
               
chr19:13757131-13757319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
32, 83
               

               
Conread position:
               
567-862
               

               
Cow position:
               
chr19:43189810-43190104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
187, 35
               

               
Conread position:
               
568-862
               

               
Cow position:
               
chr19:729861-729573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
31, 138
               

               
Conread position:
               
569-837
               

               
Cow position:
               
chr19:47986740-47987007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
30, 189
               

               
Conread position:
               
574-862
               

               
Cow position:
               
chr19:19549659-19549380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
28, 164
               

               
Conread position:
               
576-831
               

               
Cow position:
               
chr19:23832700-23832444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
98, 11
               

               
Conread position:
               
578-864
               

               
Cow position:
               
chr19:43413673-43413956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
74, 21
               

               
Conread position:
               
584-862
               

               
Cow position:
               
chr19:48744368-48744094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
15, 66
               

               
Conread position:
               
585-774
               

               
Cow position:
               
chr19:11212499-11212310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
58, 13
               

               
Conread position:
               
585-864
               

               
Cow position:
               
chr19:41024124-41024398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
586-826
               

               
Cow position:
               
chr19:16105181-16104944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
13, 191
               

               
Conread position:
               
589-862
               

               
Cow position:
               
chr19:55583432-55583711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
10, 51
               

               
Conread position:
               
590-862
               

               
Cow position:
               
chr19:40127261-40126990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
9, 32
               

               
Conread position:
               
591-862
               

               
Cow position:
               
chr19:49221710-49221447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
8, 26
               

               
Conread position:
               
598-861
               

               
Cow position:
               
chr19:12052933-12052673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
45, 23
               

               
Conread position:
               
598-861
               

               
Cow position:
               
chr19:12067658-12067918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
45, 23
               

               
Conread position:
               
598-862
               

               
Cow position:
               
chr19:33575437-33575694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
100, 51
               

               
Conread position:
               
601-861
               

               
Cow position:
               
chr19:25763030-25763279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
36, 23
               

               
Conread position:
               
601-862
               

               
Cow position:
               
chr19:11646489-11646739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
601-862
               

               
Cow position:
               
chr19:34420330-34420584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
603-860
               

               
Cow position:
               
chr19:7148146-7147883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
35, 60
               

               
Conread position:
               
603-862
               

               
Cow position:
               
chr19:13488586-13488331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
31, 194
               

               
Conread position:
               
604-862
               

               
Cow position:
               
chr19:23889561-23889311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
605-862
               

               
Cow position:
               
chr19:47185161-47184905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
136, 44
               

               
Conread position:
               
609-845
               

               
Cow position:
               
chr19:28447365-28447597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
609-861
               

               
Cow position:
               
chr19:3498028-3497773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
44, 104
               

               
Conread position:
               
609-862
               

               
Cow position:
               
chr19:11560118-11559860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
609-862
               

               
Cow position:
               
chr19:42768174-42767928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
26, 43
               

               
Conread position:
               
611-861
               

               
Cow position:
               
chr19:33913451-33913704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
615-862
               

               
Cow position:
               
chr19:10238667-10238911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
617-862
               

               
Cow position:
               
chr19:33987997-33988244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
21, 118
               

               
Conread position:
               
627-859
               

               
Cow position:
               
chr19:23087927-23088153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
641-862
               

               
Cow position:
               
chr19:23756787-23756576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
648-861
               

               
Cow position:
               
chr19:28810355-28810142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
88, 163
               

               
Conread position:
               
651-862
               

               
Cow position:
               
chr19:38732104-38732313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
651-862
               

               
Cow position:
               
chr19:40002391-40002182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
93, 75
               

               
Conread position:
               
655-862
               

               
Cow position:
               
chr19:34654641-34654435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
658-862
               

               
Cow position:
               
chr19:52728585-52728786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
88, 7
               

               
Conread position:
               
661-862
               

               
Cow position:
               
chr19:17354833-17355034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
54, 59
               

               
Conread position:
               
661-864
               

               
Cow position:
               
chr19:37467086-37466884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
141, 115
               

               
Conread position:
               
662-862
               

               
Cow position:
               
chr19:10538575-10538383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
97, 89
               

               
Conread position:
               
662-862
               

               
Cow position:
               
chr19:25835351-25835162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
662-862
               

               
Cow position:
               
chr19:44572059-44572263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
142, 44
               

               
Conread position:
               
662-864
               

               
Cow position:
               
chr19:34608221-34608022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
664-861
               

               
Cow position:
               
chr19:24692986-24693178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
667-862
               

               
Cow position:
               
chr19:25832218-25832025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
174, 109
               

               
Conread position:
               
667-862
               

               
Cow position:
               
chr19:39981717-39981914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
14, 77
               

               
Conread position:
               
683-862
               

               
Cow position:
               
chr19:19916423-19916248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
687-862
               

               
Cow position:
               
chr19:5261334-5261515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
86, 69
               

               
Conread position:
               
688-859
               

               
Cow position:
               
chr19:6854923-6855089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
694-862
               

               
Cow position:
               
chr19:33233591-33233757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
700-861
               

               
Cow position:
               
chr19:46822723-46822883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
701-864
               

               
Cow position:
               
chr19:7864072-7864232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
89, 0
               
Show alignments to all cow chromosomes.