Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8023P08.3 |
| Conread position: | 527-783 |
| Cow position: | chr24:201804-201552 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 111, 7 |
| Conread position: | 527-862 |
| Cow position: | chr24:18485169-18484831 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 7, 209 |
| Conread position: | 527-864 |
| Cow position: | chr24:6102653-6102992 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 31, 77 |
| Conread position: | 530-754 |
| Cow position: | chr24:43432624-43432845 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 27, 112 |
| Conread position: | 530-778 |
| Cow position: | chr24:2096057-2095803 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 72, 31 |
| Conread position: | 530-787 |
| Cow position: | chr24:27824290-27824550 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 93, 32 |
| Conread position: | 530-832 |
| Cow position: | chr24:27726181-27725879 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 209 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 72, 16 |
| Conread position: | 530-862 |
| Cow position: | chr24:352773-352442 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 69, 118 |
| Conread position: | 530-864 |
| Cow position: | chr24:30235705-30236036 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 63 |
| Conread position: | 531-743 |
| Cow position: | chr24:36404311-36404098 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 531-847 |
| Cow position: | chr24:29781997-29782311 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 70, 121 |
| Conread position: | 531-862 |
| Cow position: | chr24:10499047-10499380 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 56 |
| Conread position: | 531-862 |
| Cow position: | chr24:32609475-32609811 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 27, 245 |
| Conread position: | 532-861 |
| Cow position: | chr24:44987549-44987211 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 226 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 33, 229 |
| Conread position: | 533-708 |
| Cow position: | chr24:30178070-30178250 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 533-732 |
| Cow position: | chr24:6487758-6487949 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 533-771 |
| Cow position: | chr24:31324116-31324356 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 53, 221 |
| Conread position: | 533-774 |
| Cow position: | chr24:3430569-3430808 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 66, 13 |
| Conread position: | 533-774 |
| Cow position: | chr24:27748482-27748715 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 533-778 |
| Cow position: | chr24:43364194-43364437 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 34, 83 |
| Conread position: | 533-782 |
| Cow position: | chr24:43927487-43927250 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 533-793 |
| Cow position: | chr24:32070801-32071053 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 63, 115 |
| Conread position: | 533-796 |
| Cow position: | chr24:29063813-29063564 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 533-799 |
| Cow position: | chr24:24250563-24250822 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 64, 166 |
| Conread position: | 533-804 |
| Cow position: | chr24:24457411-24457148 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 29, 78 |
| Conread position: | 533-804 |
| Cow position: | chr24:33222107-33221829 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 66, 260 |
| Conread position: | 533-806 |
| Cow position: | chr24:23187082-23186811 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 197 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 66, 48 |
| Conread position: | 533-808 |
| Cow position: | chr24:15373244-15373514 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 15, 34 |
| Conread position: | 533-809 |
| Cow position: | chr24:19769328-19769603 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 44, 39 |
| Conread position: | 533-809 |
| Cow position: | chr24:28327249-28326970 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 105, 66 |
| Conread position: | 533-809 |
| Cow position: | chr24:31159452-31159723 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 66, 105 |
| Conread position: | 533-816 |
| Cow position: | chr24:33153612-33153892 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 198 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 66, 59 |
| Conread position: | 533-828 |
| Cow position: | chr24:43200441-43200148 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 206 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 69, 55 |
| Conread position: | 533-837 |
| Cow position: | chr24:26554766-26554457 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 202 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 34, 88 |
| Conread position: | 533-842 |
| Cow position: | chr24:31359161-31359460 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 217 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 66, 57 |
| Conread position: | 533-844 |
| Cow position: | chr24:6912516-6912214 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 103, 50 |
| Conread position: | 533-845 |
| Cow position: | chr24:18357218-18356908 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 48 |
| Conread position: | 533-846 |
| Cow position: | chr24:20874515-20874826 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 202 |
| Conread position: | 533-857 |
| Cow position: | chr24:39143443-39143769 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 29, 122 |
| Conread position: | 533-858 |
| Cow position: | chr24:7913837-7914167 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 32, 224 |
| Conread position: | 533-859 |
| Cow position: | chr24:11886996-11887312 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 231 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 122, 42 |
| Conread position: | 533-860 |
| Cow position: | chr24:1269633-1269937 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 533-860 |
| Cow position: | chr24:17860420-17860102 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 105, 59 |
| Conread position: | 533-860 |
| Cow position: | chr24:39483312-39483623 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 66, 107 |
| Conread position: | 533-861 |
| Cow position: | chr24:18343884-18344227 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 34, 242 |
| Conread position: | 533-861 |
| Cow position: | chr24:18999882-19000204 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 220 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 35, 85 |
| Conread position: | 533-861 |
| Cow position: | chr24:31816424-31816736 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 236, 10 |
| Conread position: | 533-861 |
| Cow position: | chr24:32204959-32204623 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 66, 115 |
| Conread position: | 533-861 |
| Cow position: | chr24:33098657-33098311 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 533-861 |
| Cow position: | chr24:34742590-34742910 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 216 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 153, 58 |
| Conread position: | 533-862 |
| Cow position: | chr24:2402539-2402215 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 127 |
| Conread position: | 533-862 |
| Cow position: | chr24:3165656-3165981 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 229 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 533-862 |
| Cow position: | chr24:3493727-3494043 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 533-862 |
| Cow position: | chr24:5141779-5142100 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 100 |
| Conread position: | 533-862 |
| Cow position: | chr24:6132038-6131725 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 105, 66 |
| Conread position: | 533-862 |
| Cow position: | chr24:11840013-11840346 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 24, 123 |
| Conread position: | 533-862 |
| Cow position: | chr24:16089071-16089391 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 257, 65 |
| Conread position: | 533-862 |
| Cow position: | chr24:17311374-17311067 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 533-862 |
| Cow position: | chr24:18474910-18474567 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 236 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 66, 266 |
| Conread position: | 533-862 |
| Cow position: | chr24:19179612-19179274 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 32, 127 |
| Conread position: | 533-862 |
| Cow position: | chr24:19800681-19801001 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 24, 113 |
| Conread position: | 533-862 |
| Cow position: | chr24:27039877-27040212 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 43, 142 |
| Conread position: | 533-862 |
| Cow position: | chr24:27608263-27607949 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 235 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 102, 50 |
| Conread position: | 533-862 |
| Cow position: | chr24:27906273-27906600 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 34, 49 |
| Conread position: | 533-862 |
| Cow position: | chr24:28303517-28303200 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 213, 20 |
| Conread position: | 533-862 |
| Cow position: | chr24:29595976-29595638 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 32, 20 |
| Conread position: | 533-862 |
| Cow position: | chr24:31036188-31036500 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 66, 42 |
| Conread position: | 533-862 |
| Cow position: | chr24:31812023-31812347 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 222 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 63, 77 |
| Conread position: | 533-862 |
| Cow position: | chr24:33944239-33944568 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 66, 42 |
| Conread position: | 533-862 |
| Cow position: | chr24:37650505-37650837 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 239 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 66, 217 |
| Conread position: | 533-864 |
| Cow position: | chr24:30229306-30229638 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 31, 66 |
| Conread position: | 533-864 |
| Cow position: | chr24:44041178-44040847 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 35, 140 |
| Conread position: | 534-695 |
| Cow position: | chr24:17363811-17363652 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 534-721 |
| Cow position: | chr24:39833676-39833493 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 65, 106 |
| Conread position: | 534-752 |
| Cow position: | chr24:29180724-29180939 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 64, 120 |
| Conread position: | 534-783 |
| Cow position: | chr24:30897702-30897452 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 68, 222 |
| Conread position: | 534-794 |
| Cow position: | chr24:27290704-27290966 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 31, 78 |
| Conread position: | 534-808 |
| Cow position: | chr24:29673355-29673629 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 26, 231 |
| Conread position: | 534-813 |
| Cow position: | chr24:18017063-18017343 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 24, 115 |
| Conread position: | 534-848 |
| Cow position: | chr24:28990400-28990710 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 230 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 65, 57 |
| Conread position: | 534-862 |
| Cow position: | chr24:211821-212132 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 65, 124 |
| Conread position: | 534-862 |
| Cow position: | chr24:6450332-6450671 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 29, 145 |
| Conread position: | 534-862 |
| Cow position: | chr24:20801510-20801183 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 216 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 23, 92 |
| Conread position: | 534-862 |
| Cow position: | chr24:33372390-33372708 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 224 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 40, 26 |
| Conread position: | 535-790 |
| Cow position: | chr24:15246797-15246552 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 130, 27 |
| Conread position: | 535-811 |
| Cow position: | chr24:5754675-5754945 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 200 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 89, 62 |
| Conread position: | 535-854 |
| Cow position: | chr24:24491173-24490871 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 535-858 |
| Cow position: | chr24:37037736-37038049 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 64, 28 |
| Conread position: | 535-862 |
| Cow position: | chr24:28062789-28063112 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 237 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 64, 86 |
| Conread position: | 535-862 |
| Cow position: | chr24:28721728-28722039 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 216 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 64, 115 |
| Conread position: | 536-809 |
| Cow position: | chr24:34008740-34008467 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 21, 244 |
| Conread position: | 536-860 |
| Cow position: | chr24:30484113-30483784 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 31, 128 |
| Conread position: | 536-862 |
| Cow position: | chr24:40300997-40301322 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 70, 114 |
| Conread position: | 536-862 |
| Cow position: | chr24:43371085-43371405 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 66, 111 |
| Conread position: | 539-706 |
| Cow position: | chr24:35794895-35794728 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 107, 61 |
| Conread position: | 539-859 |
| Cow position: | chr24:28496742-28496423 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 219 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 60, 85 |
| Conread position: | 539-861 |
| Cow position: | chr24:7476512-7476189 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 19, 105 |
| Conread position: | 539-862 |
| Cow position: | chr24:35985882-35985571 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 19, 61 |
| Conread position: | 539-862 |
| Cow position: | chr24:36173940-36173617 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 20, 62 |
| Conread position: | 540-750 |
| Cow position: | chr24:4615677-4615464 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 59, 81 |
| Conread position: | 540-858 |
| Cow position: | chr24:30314190-30313871 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 88 |
| Conread position: | 541-790 |
| Cow position: | chr24:28319357-28319118 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 97, 59 |
| Conread position: | 542-837 |
| Cow position: | chr24:32054503-32054790 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 25, 109 |
| Conread position: | 542-846 |
| Cow position: | chr24:20943011-20943306 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 57, 106 |
| Conread position: | 542-861 |
| Cow position: | chr24:15057245-15057545 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 57, 107 |
| Conread position: | 542-862 |
| Cow position: | chr24:26929101-26928779 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 16, 104 |
| Conread position: | 542-862 |
| Cow position: | chr24:27220247-27219926 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 15, 63 |
| Conread position: | 543-736 |
| Cow position: | chr24:43967656-43967462 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 543-860 |
| Cow position: | chr24:25885316-25884988 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 56, 183 |
| Conread position: | 543-862 |
| Cow position: | chr24:17104727-17104410 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 223 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 56, 107 |
| Conread position: | 543-862 |
| Cow position: | chr24:22689737-22689411 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 223 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 23, 103 |
| Conread position: | 544-776 |
| Cow position: | chr24:24755290-24755524 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 28, 59 |
| Conread position: | 547-862 |
| Cow position: | chr24:35675394-35675693 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 230 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 52, 75 |
| Conread position: | 555-793 |
| Cow position: | chr24:24662272-24662039 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 44, 26 |
| Conread position: | 555-850 |
| Cow position: | chr24:16645465-16645168 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 47, 11 |
| Conread position: | 557-861 |
| Cow position: | chr24:389960-390261 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 42, 66 |
| Conread position: | 562-839 |
| Cow position: | chr24:27349316-27349033 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 196 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 15, 28 |
| Conread position: | 565-862 |
| Cow position: | chr24:29606176-29605871 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 34, 99 |
| Conread position: | 566-862 |
| Cow position: | chr24:27713536-27713248 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 568-807 |
| Cow position: | chr24:14457853-14457618 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 18, 103 |
| Conread position: | 571-862 |
| Cow position: | chr24:29561701-29561417 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 92, 28 |
| Conread position: | 572-862 |
| Cow position: | chr24:39523573-39523288 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 205 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 27, 74 |
| Conread position: | 577-808 |
| Cow position: | chr24:39791418-39791649 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 22, 207 |
| Conread position: | 583-862 |
| Cow position: | chr24:37975096-37974821 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 16, 27 |
| Conread position: | 594-864 |
| Cow position: | chr24:230172-230444 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 200 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 5, 210 |
| Conread position: | 598-861 |
| Cow position: | chr24:28042873-28043155 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 598-863 |
| Cow position: | chr24:28342251-28342525 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 18, 188 |
| Conread position: | 601-862 |
| Cow position: | chr24:37823432-37823686 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 603-862 |
| Cow position: | chr24:13948027-13948284 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 170, 110 |
| Conread position: | 604-862 |
| Cow position: | chr24:20364503-20364254 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 45, 20 |
| Conread position: | 608-864 |
| Cow position: | chr24:27284731-27284988 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 151, 31 |
| Conread position: | 609-860 |
| Cow position: | chr24:15288732-15288987 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 25, 188 |
| Conread position: | 628-864 |
| Cow position: | chr24:2992947-2992716 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 174, 21 |
| Conread position: | 631-861 |
| Cow position: | chr24:41916191-41916418 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 62, 18 |
| Conread position: | 631-862 |
| Cow position: | chr24:2379890-2380117 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 142, 24 |
| Conread position: | 638-862 |
| Cow position: | chr24:26880693-26880917 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 126, 16 |
| Conread position: | 651-862 |
| Cow position: | chr24:5360670-5360873 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 13, 66 |
| Conread position: | 656-862 |
| Cow position: | chr24:29539972-29539768 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 661-862 |
| Cow position: | chr24:37651687-37651883 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 180, 123 |
| Conread position: | 662-857 |
| Cow position: | chr24:22133134-22133322 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 662-862 |
| Cow position: | chr24:21834996-21834801 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 662-862 |
| Cow position: | chr24:25122308-25122499 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 662-862 |
| Cow position: | chr24:29985021-29984828 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 663-862 |
| Cow position: | chr24:32891080-32890886 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 663-862 |
| Cow position: | chr24:42687812-42688003 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 666-858 |
| Cow position: | chr24:7757739-7757927 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 671-862 |
| Cow position: | chr24:3412655-3412843 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 677-861 |
| Cow position: | chr24:6886989-6887167 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 691-862 |
| Cow position: | chr24:10219393-10219224 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 711-862 |
| Cow position: | chr24:24540479-24540330 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 130, 73 |
Show alignments to all cow chromosomes.