Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8023P08.3 |
| Conread position: | 512-862 |
| Cow position: | chr25:14720591-14720916 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 244 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 285, 80 |
| Conread position: | 521-858 |
| Cow position: | chr25:12097691-12098017 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 109, 28 |
| Conread position: | 526-790 |
| Cow position: | chr25:22751159-22750894 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 73, 127 |
| Conread position: | 527-854 |
| Cow position: | chr25:20007986-20008310 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 221 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 72, 96 |
| Conread position: | 528-695 |
| Cow position: | chr25:36033290-36033456 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 71, 121 |
| Conread position: | 528-793 |
| Cow position: | chr25:14157475-14157740 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 9, 15 |
| Conread position: | 528-864 |
| Cow position: | chr25:14833806-14833482 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 71, 89 |
| Conread position: | 530-688 |
| Cow position: | chr25:16001670-16001514 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 69, 118 |
| Conread position: | 530-774 |
| Cow position: | chr25:4547862-4547621 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 68, 86 |
| Conread position: | 530-789 |
| Cow position: | chr25:18266014-18266276 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 530-794 |
| Cow position: | chr25:17975513-17975261 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 181 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 530-808 |
| Cow position: | chr25:5474372-5474103 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 27, 102 |
| Conread position: | 530-813 |
| Cow position: | chr25:12117134-12116863 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 113, 69 |
| Conread position: | 530-860 |
| Cow position: | chr25:5846949-5846623 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 72, 31 |
| Conread position: | 530-861 |
| Cow position: | chr25:13272427-13272752 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 229 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 69, 43 |
| Conread position: | 530-862 |
| Cow position: | chr25:22178775-22179094 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 87, 69 |
| Conread position: | 530-864 |
| Cow position: | chr25:18721261-18720941 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 238 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 12, 68 |
| Conread position: | 531-804 |
| Cow position: | chr25:15254476-15254223 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 531-807 |
| Cow position: | chr25:18905740-18906015 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 27, 102 |
| Conread position: | 533-681 |
| Cow position: | chr25:7329405-7329553 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 533-741 |
| Cow position: | chr25:10218193-10217985 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 24, 131 |
| Conread position: | 533-750 |
| Cow position: | chr25:21895029-21894812 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 80, 66 |
| Conread position: | 533-774 |
| Cow position: | chr25:36036923-36036682 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 66, 82 |
| Conread position: | 533-782 |
| Cow position: | chr25:12778671-12778436 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 226, 50 |
| Conread position: | 533-790 |
| Cow position: | chr25:6961296-6961040 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 66, 15 |
| Conread position: | 533-793 |
| Cow position: | chr25:32191528-32191770 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 533-794 |
| Cow position: | chr25:4681094-4681343 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 533-804 |
| Cow position: | chr25:23917700-23917967 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 27, 160 |
| Conread position: | 533-806 |
| Cow position: | chr25:38981960-38982222 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 66, 113 |
| Conread position: | 533-808 |
| Cow position: | chr25:28188091-28187816 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 25, 139 |
| Conread position: | 533-812 |
| Cow position: | chr25:15273546-15273806 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 533-845 |
| Cow position: | chr25:15714742-15715039 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 533-845 |
| Cow position: | chr25:30279346-30279027 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 262, 13 |
| Conread position: | 533-846 |
| Cow position: | chr25:16064746-16065050 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 210 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 24, 189 |
| Conread position: | 533-850 |
| Cow position: | chr25:788122-788429 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 533-852 |
| Cow position: | chr25:6464177-6463854 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 32, 197 |
| Conread position: | 533-852 |
| Cow position: | chr25:20348716-20349048 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 30, 240 |
| Conread position: | 533-852 |
| Cow position: | chr25:26133895-26134220 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 32, 103 |
| Conread position: | 533-859 |
| Cow position: | chr25:2624666-2624975 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 58 |
| Conread position: | 533-860 |
| Cow position: | chr25:7007772-7008102 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 111, 60 |
| Conread position: | 533-860 |
| Cow position: | chr25:11661959-11661648 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 223 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 69, 107 |
| Conread position: | 533-861 |
| Cow position: | chr25:7641593-7641272 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 33, 28 |
| Conread position: | 533-861 |
| Cow position: | chr25:23245152-23244821 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 114 |
| Conread position: | 533-861 |
| Cow position: | chr25:26523822-26524145 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 73, 82 |
| Conread position: | 533-861 |
| Cow position: | chr25:30852614-30852948 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 227 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 88, 54 |
| Conread position: | 533-861 |
| Cow position: | chr25:41151103-41150781 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 99 |
| Conread position: | 533-862 |
| Cow position: | chr25:2414676-2414981 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 119, 62 |
| Conread position: | 533-862 |
| Cow position: | chr25:3992651-3992964 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 232 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 155, 49 |
| Conread position: | 533-862 |
| Cow position: | chr25:4521977-4521657 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 231 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 51, 47 |
| Conread position: | 533-862 |
| Cow position: | chr25:7216688-7217001 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 66, 62 |
| Conread position: | 533-862 |
| Cow position: | chr25:7750313-7750631 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 227 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 533-862 |
| Cow position: | chr25:14512968-14513290 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 69, 232 |
| Conread position: | 533-862 |
| Cow position: | chr25:14791611-14791938 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 66, 182 |
| Conread position: | 533-862 |
| Cow position: | chr25:16319273-16318966 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 66, 37 |
| Conread position: | 533-862 |
| Cow position: | chr25:16921933-16921609 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 221, 55 |
| Conread position: | 533-862 |
| Cow position: | chr25:17566442-17566775 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 32, 120 |
| Conread position: | 533-862 |
| Cow position: | chr25:17658470-17658796 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 215 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 34, 51 |
| Conread position: | 533-862 |
| Cow position: | chr25:19129710-19130038 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 118 |
| Conread position: | 533-862 |
| Cow position: | chr25:20023532-20023210 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 84, 66 |
| Conread position: | 533-862 |
| Cow position: | chr25:20047363-20047694 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 32, 66 |
| Conread position: | 533-862 |
| Cow position: | chr25:20785727-20785403 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 238 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 66, 18 |
| Conread position: | 533-862 |
| Cow position: | chr25:21191348-21191661 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 233 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 66, 47 |
| Conread position: | 533-862 |
| Cow position: | chr25:21668103-21668432 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 225 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 64, 253 |
| Conread position: | 533-862 |
| Cow position: | chr25:26089957-26089643 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 231 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 101, 66 |
| Conread position: | 533-862 |
| Cow position: | chr25:26679085-26679411 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 116 |
| Conread position: | 533-862 |
| Cow position: | chr25:26700894-26701204 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 213 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 533-862 |
| Cow position: | chr25:33550366-33550695 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 42 |
| Conread position: | 533-862 |
| Cow position: | chr25:36081734-36082051 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 66, 113 |
| Conread position: | 533-862 |
| Cow position: | chr25:36746585-36746264 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 257, 59 |
| Conread position: | 533-864 |
| Cow position: | chr25:11585379-11585715 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 232 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 66, 32 |
| Conread position: | 533-864 |
| Cow position: | chr25:19679203-19679538 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 43 |
| Conread position: | 533-864 |
| Cow position: | chr25:21193083-21192755 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 244 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 48, 154 |
| Conread position: | 533-864 |
| Cow position: | chr25:23829262-23828944 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 111, 31 |
| Conread position: | 533-864 |
| Cow position: | chr25:35347765-35348092 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 118 |
| Conread position: | 534-689 |
| Cow position: | chr25:11054763-11054916 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 65, 78 |
| Conread position: | 534-707 |
| Cow position: | chr25:9642215-9642388 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 65, 31 |
| Conread position: | 534-787 |
| Cow position: | chr25:12319489-12319243 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 65, 182 |
| Conread position: | 534-854 |
| Cow position: | chr25:7380982-7380662 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 12, 97 |
| Conread position: | 534-861 |
| Cow position: | chr25:24669578-24669269 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 237 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 65, 126 |
| Conread position: | 534-862 |
| Cow position: | chr25:9990234-9989918 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 233 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 268, 63 |
| Conread position: | 534-862 |
| Cow position: | chr25:13443551-13443223 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 68, 27 |
| Conread position: | 534-862 |
| Cow position: | chr25:35612445-35612116 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 220, 60 |
| Conread position: | 534-862 |
| Cow position: | chr25:36835566-36835248 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 24, 56 |
| Conread position: | 534-864 |
| Cow position: | chr25:8120638-8120967 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 20, 89 |
| Conread position: | 535-748 |
| Cow position: | chr25:15377187-15377397 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 64, 55 |
| Conread position: | 535-799 |
| Cow position: | chr25:27531413-27531151 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 64, 56 |
| Conread position: | 535-860 |
| Cow position: | chr25:34979008-34978675 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 96, 64 |
| Conread position: | 535-862 |
| Cow position: | chr25:7673139-7673491 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 234 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 535-862 |
| Cow position: | chr25:12609204-12609527 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 238, 64 |
| Conread position: | 535-862 |
| Cow position: | chr25:23053418-23053747 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 23, 89 |
| Conread position: | 535-862 |
| Cow position: | chr25:33686820-33686498 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 62, 28 |
| Conread position: | 536-708 |
| Cow position: | chr25:7801000-7801172 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 61, 49 |
| Conread position: | 536-862 |
| Cow position: | chr25:22315063-22315388 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 60 |
| Conread position: | 536-862 |
| Cow position: | chr25:33557135-33557450 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 9, 20 |
| Conread position: | 536-864 |
| Cow position: | chr25:20523370-20523052 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 537-845 |
| Cow position: | chr25:9843039-9843350 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 224 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 66, 14 |
| Conread position: | 537-864 |
| Cow position: | chr25:4245551-4245851 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 539-807 |
| Cow position: | chr25:34169817-34170074 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 539-862 |
| Cow position: | chr25:26136960-26136636 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 21, 110 |
| Conread position: | 540-745 |
| Cow position: | chr25:24051827-24052034 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 59, 70 |
| Conread position: | 541-782 |
| Cow position: | chr25:11436941-11436702 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 61, 40 |
| Conread position: | 541-845 |
| Cow position: | chr25:15634611-15634299 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 24, 210 |
| Conread position: | 541-848 |
| Cow position: | chr25:18294452-18294141 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 24, 86 |
| Conread position: | 541-857 |
| Cow position: | chr25:17342318-17342640 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 24, 227 |
| Conread position: | 541-862 |
| Cow position: | chr25:12510144-12509837 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 541-862 |
| Cow position: | chr25:19364193-19363876 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 13 |
| Conread position: | 541-862 |
| Cow position: | chr25:22756474-22756796 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 17, 108 |
| Conread position: | 542-862 |
| Cow position: | chr25:15410049-15409738 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 213 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 16, 61 |
| Conread position: | 543-736 |
| Cow position: | chr25:7449675-7449859 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 56, 32 |
| Conread position: | 543-808 |
| Cow position: | chr25:22531152-22531410 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 543-843 |
| Cow position: | chr25:24572936-24573228 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 56, 67 |
| Conread position: | 543-860 |
| Cow position: | chr25:11051397-11051704 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 59, 34 |
| Conread position: | 543-861 |
| Cow position: | chr25:6683195-6682867 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 230, 55 |
| Conread position: | 543-861 |
| Cow position: | chr25:18202059-18201746 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 215 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 24, 104 |
| Conread position: | 544-862 |
| Cow position: | chr25:21893204-21893518 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 62, 101 |
| Conread position: | 549-862 |
| Cow position: | chr25:6292440-6292753 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 9, 100 |
| Conread position: | 550-847 |
| Cow position: | chr25:33457604-33457898 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 211 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 49, 83 |
| Conread position: | 556-864 |
| Cow position: | chr25:30816766-30817078 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 557-862 |
| Cow position: | chr25:11433072-11432768 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 226 |
| Conread position: | 557-862 |
| Cow position: | chr25:17119626-17119928 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 42, 65 |
| Conread position: | 564-737 |
| Cow position: | chr25:26642471-26642647 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 565-861 |
| Cow position: | chr25:36872251-36872546 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 213 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 34, 87 |
| Conread position: | 568-862 |
| Cow position: | chr25:25716544-25716829 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 16, 32 |
| Conread position: | 589-845 |
| Cow position: | chr25:7799466-7799721 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 13, 50 |
| Conread position: | 589-864 |
| Cow position: | chr25:12305189-12305465 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 10, 73 |
| Conread position: | 590-806 |
| Cow position: | chr25:23745171-23745387 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 15, 167 |
| Conread position: | 590-854 |
| Cow position: | chr25:12806958-12807219 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 9, 57 |
| Conread position: | 598-809 |
| Cow position: | chr25:23504970-23505184 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 35, 185 |
| Conread position: | 598-823 |
| Cow position: | chr25:40931198-40931417 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 54, 26 |
| Conread position: | 604-860 |
| Cow position: | chr25:19478602-19478872 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 169, 0 |
| Conread position: | 608-862 |
| Cow position: | chr25:1840254-1840505 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 44, 177 |
| Conread position: | 609-862 |
| Cow position: | chr25:26306272-26306019 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 143, 148 |
| Conread position: | 631-862 |
| Cow position: | chr25:35339235-35339006 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 95, 20 |
| Conread position: | 632-864 |
| Cow position: | chr25:22348508-22348272 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 157, 0 |
| Conread position: | 633-796 |
| Cow position: | chr25:18810300-18810464 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 138, 16 |
| Conread position: | 633-861 |
| Cow position: | chr25:22298594-22298815 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 638-862 |
| Cow position: | chr25:13826398-13826615 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 31, 11 |
| Conread position: | 640-864 |
| Cow position: | chr25:35109306-35109092 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 641-862 |
| Cow position: | chr25:18288805-18288586 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 5, 60 |
| Conread position: | 652-860 |
| Cow position: | chr25:13222875-13223080 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 660-862 |
| Cow position: | chr25:20202896-20203092 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 662-823 |
| Cow position: | chr25:15463572-15463731 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 662-845 |
| Cow position: | chr25:9107539-9107363 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 662-862 |
| Cow position: | chr25:36873348-36873153 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 663-860 |
| Cow position: | chr25:13823733-13823537 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 664-860 |
| Cow position: | chr25:36873069-36872873 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 664-862 |
| Cow position: | chr25:9574143-9573951 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 673-862 |
| Cow position: | chr25:31657281-31657096 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 680-859 |
| Cow position: | chr25:8347655-8347834 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 128, 96 |
| Conread position: | 680-862 |
| Cow position: | chr25:11060135-11060319 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 120, 100 |
| Conread position: | 681-862 |
| Cow position: | chr25:24115312-24115131 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 685-862 |
| Cow position: | chr25:15349897-15349725 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 700-862 |
| Cow position: | chr25:18934612-18934452 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 701-862 |
| Cow position: | chr25:4157222-4157063 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 719-862 |
| Cow position: | chr25:17141143-17141287 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 6, 0 |
Show alignments to all cow chromosomes.