Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8023P08.3
        

               Conread position:
               527-862
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               213
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               33, 55
               

               Conread position:
               530-694
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               530-748
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               530-774
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               68, 9
               

               Conread position:
               530-793
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               32, 173
               

               Conread position:
               530-807
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               530-808
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               69, 104
               

               Conread position:
               530-862
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               108, 32
               

               Conread position:
               530-862
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 59
               

               Conread position:
               530-862
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               35, 15
               

               Conread position:
               530-862
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               531-862
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 68
               

               Conread position:
               533-711
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               533-716
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               66, 117
               

               Conread position:
               533-720
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               533-744
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               14, 119
               

               Conread position:
               533-774
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               117, 44
               

               Conread position:
               533-774
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               533-788
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               25, 114
               

               Conread position:
               533-795
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               32, 94
               

               Conread position:
               533-804
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               66, 39
               

               Conread position:
               533-805
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               533-807
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               66, 35
               

               Conread position:
               533-808
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               198
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               66, 181
               

               Conread position:
               533-808
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               66, 116
               

               Conread position:
               533-817
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               34, 114
               

               Conread position:
               533-821
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               66, 114
               

               Conread position:
               533-823
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               66, 120
               

               Conread position:
               533-843
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               28, 83
               

               Conread position:
               533-862
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               29, 68
               

               Conread position:
               533-862
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               213
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               213, 28
               

               Conread position:
               533-862
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               26, 102
               

               Conread position:
               533-862
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               231
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               70, 47
               

               Conread position:
               533-862
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               66, 115
               

               Conread position:
               533-862
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               217
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               24, 160
               

               Conread position:
               533-862
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               533-862
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               239, 38
               

               Conread position:
               533-862
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 70
               

               Conread position:
               533-862
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               65, 119
               

               Conread position:
               533-862
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               533-862
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               24, 247
               

               Conread position:
               533-862
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               29, 68
               

               Conread position:
               533-863
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               229
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               66, 182
               

               Conread position:
               533-864
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               533-864
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               233
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               70, 22
               

               Conread position:
               533-864
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               34, 115
               

               Conread position:
               534-714
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               65, 89
               

               Conread position:
               534-804
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               65, 15
               

               Conread position:
               534-808
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               65, 31
               

               Conread position:
               534-838
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               31, 68
               

               Conread position:
               534-860
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 125
               

               Conread position:
               534-860
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               534-861
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               226
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               65, 99
               

               Conread position:
               534-862
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 58
               

               Conread position:
               534-862
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               23, 107
               

               Conread position:
               534-862
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               217
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               65, 189
               

               Conread position:
               534-862
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               236
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               31, 61
               

               Conread position:
               535-809
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               30, 120
               

               Conread position:
               535-862
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               103, 65
               

               Conread position:
               535-862
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               225
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               535-862
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               82, 63
               

               Conread position:
               535-862
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               231
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               64, 118
               

               Conread position:
               536-862
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               217
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               63, 36
               

               Conread position:
               539-794
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               60, 191
               

               Conread position:
               539-808
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               60, 121
               

               Conread position:
               540-692
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               59, 24
               

               Conread position:
               540-861
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               25, 126
               

               Conread position:
               540-862
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               24, 118
               

               Conread position:
               541-753
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               166
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               60, 93
               

               Conread position:
               541-860
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               26, 5
               

               Conread position:
               542-687
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               543-845
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               251, 54
               

               Conread position:
               543-862
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               211
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               55, 109
               

               Conread position:
               545-862
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               206, 46
               

               Conread position:
               550-864
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               227
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               49, 163
               

               Conread position:
               550-864
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               232
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               85, 49
               

               Conread position:
               565-862
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               34, 90
               

               Conread position:
               566-835
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               568-862
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               31, 179
               

               Conread position:
               568-862
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               571-864
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               206
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               575-862
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               24, 13
               

               Conread position:
               589-862
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               10, 63
               

               Conread position:
               598-862
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               157, 0
               

               Conread position:
               604-864
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               606-808
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               609-861
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               137, 30
               

               Conread position:
               610-862
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               180, 14
               

               Conread position:
               614-862
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               177, 37
               

               Conread position:
               615-864
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               117, 160
               

               Conread position:
               624-862
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               43, 63
               

               Conread position:
               624-864
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               634-858
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               60, 10
               

               Conread position:
               639-862
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               651-861
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               653-835
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               172, 0
               

               Conread position:
               662-862
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               662-862
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               673-861
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               674-862
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               90, 99
               

               Conread position:
               682-862
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               710-862
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               50, 44
               
Show alignments to all cow chromosomes.