Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8023P08.3 |
| Conread position: | 527-862 |
| Cow position: | chr29:24292720-24293055 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 223 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 32, 66 |
| Conread position: | 527-864 |
| Cow position: | chr29:43099892-43099562 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 226 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 72, 18 |
| Conread position: | 530-788 |
| Cow position: | chr29:26615867-26615605 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 69, 110 |
| Conread position: | 530-788 |
| Cow position: | chr29:39567542-39567792 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 69, 119 |
| Conread position: | 530-809 |
| Cow position: | chr29:10156450-10156176 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 72, 163 |
| Conread position: | 530-829 |
| Cow position: | chr29:28166358-28166072 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 530-862 |
| Cow position: | chr29:12680013-12680343 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 110 |
| Conread position: | 530-862 |
| Cow position: | chr29:31489176-31489509 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 69, 103 |
| Conread position: | 530-862 |
| Cow position: | chr29:40117427-40117750 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 228 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 69, 10 |
| Conread position: | 531-862 |
| Cow position: | chr29:31928837-31929171 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 231 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 68, 113 |
| Conread position: | 532-862 |
| Cow position: | chr29:4120700-4121041 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 222 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 32, 231 |
| Conread position: | 532-864 |
| Cow position: | chr29:22613283-22613608 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 225 |
| Conread position: | 533-708 |
| Cow position: | chr29:42849081-42849256 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 65, 108 |
| Conread position: | 533-712 |
| Cow position: | chr29:31594272-31594092 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 73, 124 |
| Conread position: | 533-744 |
| Cow position: | chr29:43009224-43009017 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 66, 116 |
| Conread position: | 533-750 |
| Cow position: | chr29:24103687-24103468 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 66, 88 |
| Conread position: | 533-774 |
| Cow position: | chr29:22162395-22162152 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 180 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 533-788 |
| Cow position: | chr29:17607278-17607527 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 66, 50 |
| Conread position: | 533-795 |
| Cow position: | chr29:5186637-5186375 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 120, 38 |
| Conread position: | 533-798 |
| Cow position: | chr29:20903426-20903171 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 66, 32 |
| Conread position: | 533-800 |
| Cow position: | chr29:36216975-36217235 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 66, 91 |
| Conread position: | 533-804 |
| Cow position: | chr29:4875035-4874755 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 68, 226 |
| Conread position: | 533-807 |
| Cow position: | chr29:29314797-29314518 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 533-808 |
| Cow position: | chr29:23244022-23243749 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 69, 135 |
| Conread position: | 533-808 |
| Cow position: | chr29:32211198-32210942 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 66, 76 |
| Conread position: | 533-808 |
| Cow position: | chr29:40959990-40959719 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 25, 81 |
| Conread position: | 533-809 |
| Cow position: | chr29:13372523-13372793 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 66, 99 |
| Conread position: | 533-816 |
| Cow position: | chr29:27588781-27589060 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 219, 66 |
| Conread position: | 533-839 |
| Cow position: | chr29:9718911-9718613 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 66, 55 |
| Conread position: | 533-846 |
| Cow position: | chr29:87160-86835 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 214 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 35, 102 |
| Conread position: | 533-852 |
| Cow position: | chr29:28396546-28396872 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 34, 69 |
| Conread position: | 533-854 |
| Cow position: | chr29:29057039-29057353 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 35, 65 |
| Conread position: | 533-857 |
| Cow position: | chr29:38581833-38582150 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 25, 102 |
| Conread position: | 533-858 |
| Cow position: | chr29:17154625-17154943 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 225 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 66, 185 |
| Conread position: | 533-858 |
| Cow position: | chr29:25814977-25814654 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 30, 63 |
| Conread position: | 533-860 |
| Cow position: | chr29:5892708-5893029 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 69, 9 |
| Conread position: | 533-860 |
| Cow position: | chr29:43328498-43328815 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 67, 232 |
| Conread position: | 533-861 |
| Cow position: | chr29:35501793-35501481 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 228 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 77, 66 |
| Conread position: | 533-862 |
| Cow position: | chr29:2744414-2744084 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 217 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 66, 224 |
| Conread position: | 533-862 |
| Cow position: | chr29:5409289-5408957 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 24, 97 |
| Conread position: | 533-862 |
| Cow position: | chr29:10838808-10839124 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 66, 120 |
| Conread position: | 533-862 |
| Cow position: | chr29:17296989-17297323 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 230 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 32, 122 |
| Conread position: | 533-862 |
| Cow position: | chr29:19762134-19762448 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 533-862 |
| Cow position: | chr29:19949171-19949490 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 243 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 66, 26 |
| Conread position: | 533-862 |
| Cow position: | chr29:22714866-22714525 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 66, 99 |
| Conread position: | 533-862 |
| Cow position: | chr29:24952546-24952872 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 66, 126 |
| Conread position: | 533-862 |
| Cow position: | chr29:25091970-25092289 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 87 |
| Conread position: | 533-862 |
| Cow position: | chr29:31674488-31674816 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 228 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 105, 66 |
| Conread position: | 533-862 |
| Cow position: | chr29:34745804-34745476 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 7, 146 |
| Conread position: | 533-862 |
| Cow position: | chr29:34773876-34773564 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 238 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 66, 107 |
| Conread position: | 533-862 |
| Cow position: | chr29:35084365-35084038 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 34, 93 |
| Conread position: | 533-862 |
| Cow position: | chr29:35291948-35292271 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 97, 64 |
| Conread position: | 533-862 |
| Cow position: | chr29:35677692-35677356 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 32, 229 |
| Conread position: | 533-862 |
| Cow position: | chr29:39111457-39111139 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 231 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 66, 210 |
| Conread position: | 533-862 |
| Cow position: | chr29:42364156-42363834 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 66, 119 |
| Conread position: | 533-863 |
| Cow position: | chr29:4520193-4520518 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 66, 122 |
| Conread position: | 533-863 |
| Cow position: | chr29:13639512-13639183 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 66, 88 |
| Conread position: | 533-864 |
| Cow position: | chr29:4480314-4479980 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 101 |
| Conread position: | 533-864 |
| Cow position: | chr29:9709554-9709880 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 232 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 533-864 |
| Cow position: | chr29:10456701-10456393 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 222 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 64, 101 |
| Conread position: | 533-864 |
| Cow position: | chr29:36530725-36531053 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 77 |
| Conread position: | 534-793 |
| Cow position: | chr29:463795-463536 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 31, 61 |
| Conread position: | 534-837 |
| Cow position: | chr29:29974903-29975199 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 72, 34 |
| Conread position: | 534-859 |
| Cow position: | chr29:11562474-11562808 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 225 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 65, 75 |
| Conread position: | 534-861 |
| Cow position: | chr29:17462927-17462595 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 12, 69 |
| Conread position: | 534-861 |
| Cow position: | chr29:30440784-30441123 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 534-862 |
| Cow position: | chr29:18462696-18462369 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 115, 65 |
| Conread position: | 534-862 |
| Cow position: | chr29:25737559-25737234 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 254 |
| Conread position: | 534-862 |
| Cow position: | chr29:29769492-29769169 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 117 |
| Conread position: | 534-864 |
| Cow position: | chr29:12784098-12783768 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 33, 113 |
| Conread position: | 534-864 |
| Cow position: | chr29:22068892-22068554 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 31, 195 |
| Conread position: | 535-721 |
| Cow position: | chr29:1124515-1124699 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 64, 126 |
| Conread position: | 535-793 |
| Cow position: | chr29:9912032-9912291 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 64, 230 |
| Conread position: | 535-832 |
| Cow position: | chr29:11646955-11647244 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 103, 57 |
| Conread position: | 535-852 |
| Cow position: | chr29:24045850-24046173 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 24, 233 |
| Conread position: | 535-861 |
| Cow position: | chr29:17222272-17222600 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 223 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 22, 104 |
| Conread position: | 535-862 |
| Cow position: | chr29:35458915-35458584 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 64, 29 |
| Conread position: | 535-862 |
| Cow position: | chr29:37618166-37618493 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 98, 64 |
| Conread position: | 535-864 |
| Cow position: | chr29:1395456-1395759 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 64, 74 |
| Conread position: | 536-760 |
| Cow position: | chr29:40166107-40166326 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 111, 63 |
| Conread position: | 536-774 |
| Cow position: | chr29:27329753-27329989 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 66, 116 |
| Conread position: | 536-862 |
| Cow position: | chr29:22690084-22690412 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 22, 69 |
| Conread position: | 536-862 |
| Cow position: | chr29:34297704-34297386 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 61, 25 |
| Conread position: | 539-796 |
| Cow position: | chr29:4002760-4003009 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 169, 50 |
| Conread position: | 539-845 |
| Cow position: | chr29:10058672-10058372 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 210 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 99, 60 |
| Conread position: | 539-850 |
| Cow position: | chr29:1556796-1557100 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 60, 42 |
| Conread position: | 539-862 |
| Cow position: | chr29:31943744-31944053 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 202, 57 |
| Conread position: | 540-846 |
| Cow position: | chr29:29795523-29795211 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 25, 83 |
| Conread position: | 540-852 |
| Cow position: | chr29:465532-465223 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 25, 45 |
| Conread position: | 541-864 |
| Cow position: | chr29:17109834-17110140 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 81 |
| Conread position: | 542-862 |
| Cow position: | chr29:28735178-28734862 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 16, 59 |
| Conread position: | 543-808 |
| Cow position: | chr29:45005757-45005500 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 103, 56 |
| Conread position: | 545-788 |
| Cow position: | chr29:29176745-29176506 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 57, 89 |
| Conread position: | 546-858 |
| Cow position: | chr29:34359109-34358797 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 218 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 107, 98 |
| Conread position: | 556-861 |
| Cow position: | chr29:23874345-23874646 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 208 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 214, 7 |
| Conread position: | 556-862 |
| Cow position: | chr29:27846350-27846669 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 189, 43 |
| Conread position: | 557-808 |
| Cow position: | chr29:26559358-26559115 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 195, 31 |
| Conread position: | 558-862 |
| Cow position: | chr29:5063031-5063328 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 47, 19 |
| Conread position: | 559-862 |
| Cow position: | chr29:1614809-1615112 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 40, 125 |
| Conread position: | 567-862 |
| Cow position: | chr29:26017610-26017315 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 35, 59 |
| Conread position: | 569-862 |
| Cow position: | chr29:26778774-26779061 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 69, 30 |
| Conread position: | 570-808 |
| Cow position: | chr29:8926568-8926330 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 68, 29 |
| Conread position: | 572-774 |
| Cow position: | chr29:24578755-24578960 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 27, 185 |
| Conread position: | 584-862 |
| Cow position: | chr29:21665996-21666271 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 19, 63 |
| Conread position: | 584-862 |
| Cow position: | chr29:29923666-29923391 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 62, 81 |
| Conread position: | 586-862 |
| Cow position: | chr29:7624087-7624350 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 194 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 44, 12 |
| Conread position: | 590-862 |
| Cow position: | chr29:20770258-20770529 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 12, 122 |
| Conread position: | 598-774 |
| Cow position: | chr29:18012478-18012655 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 601-858 |
| Cow position: | chr29:23825292-23825031 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 26, 7 |
| Conread position: | 601-861 |
| Cow position: | chr29:41112948-41112706 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 158, 35 |
| Conread position: | 601-862 |
| Cow position: | chr29:22029031-22028776 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 40, 118 |
| Conread position: | 601-862 |
| Cow position: | chr29:29324487-29324235 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 190, 31 |
| Conread position: | 601-863 |
| Cow position: | chr29:23220575-23220302 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 172, 144 |
| Conread position: | 602-862 |
| Cow position: | chr29:36952372-36952127 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 41, 109 |
| Conread position: | 604-858 |
| Cow position: | chr29:36248964-36249219 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 148, 157 |
| Conread position: | 609-807 |
| Cow position: | chr29:38978464-38978661 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 174, 133 |
| Conread position: | 609-861 |
| Cow position: | chr29:30548708-30548957 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 185, 177 |
| Conread position: | 609-864 |
| Cow position: | chr29:44139311-44139058 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 621-862 |
| Cow position: | chr29:23155174-23155420 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 152, 30 |
| Conread position: | 629-861 |
| Cow position: | chr29:44991471-44991241 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 221, 73 |
| Conread position: | 631-862 |
| Cow position: | chr29:16290680-16290908 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 138, 121 |
| Conread position: | 632-862 |
| Cow position: | chr29:31651365-31651587 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 22, 141 |
| Conread position: | 637-862 |
| Cow position: | chr29:32197657-32197879 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 648-862 |
| Cow position: | chr29:9310571-9310788 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 75, 65 |
| Conread position: | 651-862 |
| Cow position: | chr29:17804509-17804715 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 651-862 |
| Cow position: | chr29:26540566-26540355 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 121, 137 |
| Conread position: | 652-845 |
| Cow position: | chr29:22723576-22723767 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 653-782 |
| Cow position: | chr29:742673-742544 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 654-862 |
| Cow position: | chr29:7290753-7290954 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 657-862 |
| Cow position: | chr29:19125303-19125515 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 154, 9 |
| Conread position: | 661-862 |
| Cow position: | chr29:9378621-9378820 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 89, 98 |
| Conread position: | 661-862 |
| Cow position: | chr29:36357113-36357313 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 147, 48 |
| Conread position: | 661-864 |
| Cow position: | chr29:4070612-4070807 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 663-861 |
| Cow position: | chr29:29308586-29308398 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 11, 124 |
| Conread position: | 664-862 |
| Cow position: | chr29:36781317-36781125 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 664-862 |
| Cow position: | chr29:39038282-39038084 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 666-862 |
| Cow position: | chr29:19363700-19363893 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 676-859 |
| Cow position: | chr29:43088310-43088488 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 699-862 |
| Cow position: | chr29:17282090-17282246 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 719-862 |
| Cow position: | chr29:33143312-33143171 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 65, 0 |
Show alignments to all cow chromosomes.