Cow genome map

Conread name: Ss1.1-Pig4-TMW8023P08.3

Conread position: 515-862
Cow position: chr9:8901035-8901386 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 229
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 7, 30

Conread position: 522-808
Cow position: chr9:50543243-50543529 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 187
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 80, 31

Conread position: 527-798
Cow position: chr9:18072939-18073188 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 188
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 527-862
Cow position: chr9:17799805-17799478 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 231
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 72, 225

Conread position: 527-862
Cow position: chr9:22151909-22152239 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 224
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 78, 15

Conread position: 527-862
Cow position: chr9:30138304-30137966 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 220
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 71, 214

Conread position: 527-864
Cow position: chr9:53257881-53258215 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 219
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 37, 75

Conread position: 530-674
Cow position: chr9:60037826-60037680 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 530-812
Cow position: chr9:62357356-62357634 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 183
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 69, 139

Conread position: 530-862
Cow position: chr9:17740775-17741096 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 230
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 69, 89

Conread position: 530-862
Cow position: chr9:18381032-18380711 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 233
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 30, 51

Conread position: 530-862
Cow position: chr9:22443449-22443780 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 220
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 35, 114

Conread position: 530-862
Cow position: chr9:35027993-35028324 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 221
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 31, 71

Conread position: 530-862
Cow position: chr9:45285358-45285696 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 21

Conread position: 530-862
Cow position: chr9:60394878-60395206 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 231
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 69, 104

Conread position: 530-864
Cow position: chr9:13670805-13670477 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 227
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 119, 65

Conread position: 530-864
Cow position: chr9:34697124-34697461 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 227
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 31, 112

Conread position: 531-808
Cow position: chr9:51204892-51204624 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 188
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 67, 77

Conread position: 531-864
Cow position: chr9:21030484-21030145 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 215
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 31, 125

Conread position: 531-864
Cow position: chr9:29006733-29006401 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 12

Conread position: 533-677
Cow position: chr9:41652955-41652813 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 66, 115

Conread position: 533-695
Cow position: chr9:1712307-1712467 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 65, 76

Conread position: 533-732
Cow position: chr9:38344060-38343862 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 66, 182

Conread position: 533-750
Cow position: chr9:8534515-8534736 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 152
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 72

Conread position: 533-754
Cow position: chr9:23430976-23431198 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 169
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 120, 64

Conread position: 533-754
Cow position: chr9:35904576-35904796 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 149
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 66, 111

Conread position: 533-761
Cow position: chr9:44914918-44915154 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 160
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 34, 94

Conread position: 533-774
Cow position: chr9:5509891-5509655 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 165
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 66, 76

Conread position: 533-774
Cow position: chr9:19493293-19493536 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 171
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 66, 223

Conread position: 533-786
Cow position: chr9:44921221-44921484 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 177
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 66, 0

Conread position: 533-797
Cow position: chr9:43871149-43870884 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 173
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 23, 246

Conread position: 533-801
Cow position: chr9:7634443-7634176 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 196
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 66, 237

Conread position: 533-802
Cow position: chr9:28354688-28354421 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 181
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 163, 66

Conread position: 533-803
Cow position: chr9:21888339-21888071 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 191
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 34, 120

Conread position: 533-803
Cow position: chr9:64091854-64091582 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 186
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 64, 121

Conread position: 533-807
Cow position: chr9:3738052-3738325 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 187
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 69, 95

Conread position: 533-807
Cow position: chr9:42445809-42446083 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 189
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 26, 255

Conread position: 533-807
Cow position: chr9:50139455-50139182 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 179
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 67

Conread position: 533-808
Cow position: chr9:4267814-4268086 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 197
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 66, 90

Conread position: 533-808
Cow position: chr9:8563007-8562720 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 211
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 66, 193

Conread position: 533-808
Cow position: chr9:9654142-9654411 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 193
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 66, 127

Conread position: 533-808
Cow position: chr9:18216934-18217201 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 178
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 533-809
Cow position: chr9:1938299-1938021 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 190
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 179, 29

Conread position: 533-811
Cow position: chr9:31078915-31079182 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 203
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 66, 9

Conread position: 533-824
Cow position: chr9:46316616-46316899 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 201
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 66, 55

Conread position: 533-839
Cow position: chr9:766983-767284 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 209
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 66, 102

Conread position: 533-843
Cow position: chr9:13205398-13205710 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 215
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 89, 64

Conread position: 533-844
Cow position: chr9:9403006-9403314 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 219
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 66, 101

Conread position: 533-845
Cow position: chr9:9815585-9815270 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 207
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 37, 86

Conread position: 533-845
Cow position: chr9:33119716-33120031 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 533-851
Cow position: chr9:9552257-9551946 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 225
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 69, 27

Conread position: 533-854
Cow position: chr9:23388508-23388829 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 229
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 64, 85

Conread position: 533-856
Cow position: chr9:25964658-25964992 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 216
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 32, 103

Conread position: 533-858
Cow position: chr9:44709995-44709679 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 216
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 27, 118

Conread position: 533-861
Cow position: chr9:6192293-6192613 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 232
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 69, 45

Conread position: 533-861
Cow position: chr9:11299521-11299829 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 101

Conread position: 533-861
Cow position: chr9:55118249-55117926 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 214
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 66, 106

Conread position: 533-861
Cow position: chr9:55287728-55288045 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 221
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 98, 66

Conread position: 533-861
Cow position: chr9:56773249-56772905 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 231
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 66, 61

Conread position: 533-861
Cow position: chr9:58979567-58979249 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 221
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 67, 92

Conread position: 533-861
Cow position: chr9:61303173-61302847 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 242

Conread position: 533-862
Cow position: chr9:5226998-5227317 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 226
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 32, 174

Conread position: 533-862
Cow position: chr9:5501027-5500707 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 224
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 66, 228

Conread position: 533-862
Cow position: chr9:8998526-8998196 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 230
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 66, 224

Conread position: 533-862
Cow position: chr9:9595785-9596107 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 229
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 66, 99

Conread position: 533-862
Cow position: chr9:9723714-9724036 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 221
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 49, 33

Conread position: 533-862
Cow position: chr9:9753219-9753559 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 226
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 24, 105

Conread position: 533-862
Cow position: chr9:10118495-10118823 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 222
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 66, 117

Conread position: 533-862
Cow position: chr9:13169496-13169822 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 9

Conread position: 533-862
Cow position: chr9:15805755-15806083 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 218
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 25, 43

Conread position: 533-862
Cow position: chr9:19555544-19555232 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 237
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 14, 92

Conread position: 533-862
Cow position: chr9:20091211-20090903 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 235
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 158, 57

Conread position: 533-862
Cow position: chr9:26403955-26403638 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 223
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 30, 118

Conread position: 533-862
Cow position: chr9:26477386-26477055 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 234
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 34, 116

Conread position: 533-862
Cow position: chr9:28726551-28726886 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 228
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 66, 0

Conread position: 533-862
Cow position: chr9:30124090-30123773 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 234
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 66, 82

Conread position: 533-862
Cow position: chr9:33218782-33219114 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 231
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 93, 64

Conread position: 533-862
Cow position: chr9:34286970-34286641 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 30

Conread position: 533-862
Cow position: chr9:34374762-34375084 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 236
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 45, 70

Conread position: 533-862
Cow position: chr9:34689433-34689762 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 230
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 113, 6

Conread position: 533-862
Cow position: chr9:35167342-35167012 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 222
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 90

Conread position: 533-862
Cow position: chr9:38793183-38792858 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 230
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 33, 29

Conread position: 533-862
Cow position: chr9:41679915-41679605 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 223
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 65, 101

Conread position: 533-862
Cow position: chr9:41728426-41728103 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 21

Conread position: 533-862
Cow position: chr9:42497999-42497671 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 218
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 30, 211

Conread position: 533-862
Cow position: chr9:48628197-48627866 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 55

Conread position: 533-862
Cow position: chr9:52578367-52578695 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 226
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 63, 50

Conread position: 533-862
Cow position: chr9:56032159-56032474 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 216
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 234, 16

Conread position: 533-863
Cow position: chr9:64106077-64105745 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 230
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 53, 255

Conread position: 533-864
Cow position: chr9:10144306-10144645 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 229
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 21, 119

Conread position: 533-864
Cow position: chr9:30477611-30477931 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 213
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 78

Conread position: 534-699
Cow position: chr9:29034863-29035031 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 65, 10

Conread position: 534-753
Cow position: chr9:43875553-43875768 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 65, 26

Conread position: 534-754
Cow position: chr9:24873000-24872785 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 151
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 218, 62

Conread position: 534-782
Cow position: chr9:60027366-60027119 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 176
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 68, 40

Conread position: 534-789
Cow position: chr9:5209749-5209498 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 167
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 65, 94

Conread position: 534-791
Cow position: chr9:5763465-5763717 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 180
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 63, 0

Conread position: 534-807
Cow position: chr9:11319465-11319735 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 184
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 65, 90

Conread position: 534-830
Cow position: chr9:48106949-48107236 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 198
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 24, 65

Conread position: 534-842
Cow position: chr9:44831886-44832185 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 214
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 65, 0

Conread position: 534-844
Cow position: chr9:20848100-20847802 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 215
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 68, 188

Conread position: 534-860
Cow position: chr9:29184964-29185295 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 218
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 62, 231

Conread position: 534-860
Cow position: chr9:51720733-51721042 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 225
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 33, 128

Conread position: 534-861
Cow position: chr9:5456005-5456328 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 218
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 26, 103

Conread position: 534-862
Cow position: chr9:4341001-4341313 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 98

Conread position: 534-862
Cow position: chr9:5263669-5263347 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 235
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 65, 43

Conread position: 534-862
Cow position: chr9:5433807-5433488 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 223
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 28, 121

Conread position: 534-862
Cow position: chr9:11123316-11123637 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 213
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 65, 29

Conread position: 534-862
Cow position: chr9:12225812-12226142 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 222
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 31, 66

Conread position: 534-862
Cow position: chr9:17871935-17872264 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 247

Conread position: 534-862
Cow position: chr9:36490723-36491061 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 233
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 64, 0

Conread position: 534-862
Cow position: chr9:55256382-55256706 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 129

Conread position: 535-699
Cow position: chr9:28773289-28773126 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 64, 116

Conread position: 535-808
Cow position: chr9:9405883-9406155 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 190
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 100, 64

Conread position: 535-845
Cow position: chr9:39011309-39011610 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 216
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 64, 0

Conread position: 535-857
Cow position: chr9:26279009-26279325 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 225
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 64, 27

Conread position: 535-862
Cow position: chr9:21459990-21460310 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 238
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 108, 27

Conread position: 535-862
Cow position: chr9:32307069-32307391 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 212
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 64, 90

Conread position: 535-862
Cow position: chr9:36410188-36410507 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 216
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 117

Conread position: 535-862
Cow position: chr9:45141437-45141753 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 14

Conread position: 535-862
Cow position: chr9:55795924-55795601 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 223
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 64, 27

Conread position: 536-809
Cow position: chr9:50080879-50081143 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 180
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 21, 103

Conread position: 536-861
Cow position: chr9:19067944-19067613 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 230
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 237, 49

Conread position: 536-862
Cow position: chr9:34957888-34958209 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 62

Conread position: 536-864
Cow position: chr9:8723960-8723636 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 216
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 108, 58

Conread position: 539-754
Cow position: chr9:49292982-49293193 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 168
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 60, 92

Conread position: 539-862
Cow position: chr9:6397617-6397943 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 215
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 19, 113

Conread position: 539-862
Cow position: chr9:24887363-24887048 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 107

Conread position: 539-862
Cow position: chr9:25804998-25804671 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 212
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 19, 64

Conread position: 539-862
Cow position: chr9:28747360-28747675 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 41

Conread position: 539-863
Cow position: chr9:12910238-12910558 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 108

Conread position: 541-861
Cow position: chr9:53762859-53762543 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 217
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 96, 111

Conread position: 541-864
Cow position: chr9:30402258-30402588 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 216
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 20, 217

Conread position: 542-691
Cow position: chr9:42509275-42509129 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 56, 0

Conread position: 542-861
Cow position: chr9:10905653-10905976 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 212
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 11

Conread position: 542-861
Cow position: chr9:52637999-52638326 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 211
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 16, 225

Conread position: 543-798
Cow position: chr9:5219009-5219264 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 176
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 55, 97

Conread position: 543-862
Cow position: chr9:20942449-20942776 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 210
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 17, 108

Conread position: 543-862
Cow position: chr9:26344809-26345119 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 34

Conread position: 544-862
Cow position: chr9:51620596-51620287 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 224
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 55, 104

Conread position: 544-862
Cow position: chr9:59013175-59013495 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 222
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 92, 175

Conread position: 545-859
Cow position: chr9:52267599-52267916 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 217
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 57, 95

Conread position: 545-859
Cow position: chr9:56453486-56453192 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 222
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 54, 0

Conread position: 545-860
Cow position: chr9:9516611-9516903 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 213
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 545-860
Cow position: chr9:27279467-27279151 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 208
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 22, 106

Conread position: 546-862
Cow position: chr9:43757694-43757387 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 234
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 53, 63

Conread position: 553-843
Cow position: chr9:7953049-7952759 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 194
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 237, 44

Conread position: 554-862
Cow position: chr9:32669799-32670103 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 204
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 45, 94

Conread position: 558-802
Cow position: chr9:6596090-6596328 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 167
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 41, 92

Conread position: 565-861
Cow position: chr9:31359738-31359449 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 194
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 142, 37

Conread position: 566-854
Cow position: chr9:34284084-34283804 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 190
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 33, 44

Conread position: 566-862
Cow position: chr9:6189235-6189520 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 210
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 36, 82

Conread position: 566-862
Cow position: chr9:34410259-34410550 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 193
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 33, 67

Conread position: 566-862
Cow position: chr9:40005612-40005320 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 193
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 33, 74

Conread position: 567-861
Cow position: chr9:41283149-41282856 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 197
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 35, 83

Conread position: 567-862
Cow position: chr9:13743797-13744091 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 194
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 32, 78

Conread position: 569-862
Cow position: chr9:8636803-8636521 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 200
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 30, 84

Conread position: 570-860
Cow position: chr9:44822177-44822477 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 204
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 63, 29

Conread position: 583-860
Cow position: chr9:9311979-9311704 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 181
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 19, 8

Conread position: 583-862
Cow position: chr9:6952226-6951955 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 192
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 63, 132

Conread position: 585-859
Cow position: chr9:33584565-33584838 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 200
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 14, 90

Conread position: 585-862
Cow position: chr9:53109370-53109094 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 190
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 14, 126

Conread position: 585-862
Cow position: chr9:58131846-58132105 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 190
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 17, 60

Conread position: 586-864
Cow position: chr9:38941315-38941596 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 183
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 16, 60

Conread position: 586-864
Cow position: chr9:54493254-54492979 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 193
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 13, 9

Conread position: 587-861
Cow position: chr9:17840561-17840835 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 198
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 62, 17

Conread position: 589-862
Cow position: chr9:23955870-23956134 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 195
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 10, 59

Conread position: 593-799
Cow position: chr9:28754929-28754724 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 141
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 6, 181

Conread position: 594-809
Cow position: chr9:32981963-32982180 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 5, 56

Conread position: 601-862
Cow position: chr9:9460076-9459832 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 184
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 91, 43

Conread position: 602-861
Cow position: chr9:29194923-29195188 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 184
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 170, 19

Conread position: 609-862
Cow position: chr9:8628823-8629069 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 174
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 106, 0

Conread position: 610-862
Cow position: chr9:37199215-37198970 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 178
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 197, 33

Conread position: 614-863
Cow position: chr9:34024789-34024541 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 162
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 170, 0

Conread position: 615-862
Cow position: chr9:9686327-9686575 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 172
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 175, 23

Conread position: 624-862
Cow position: chr9:33823199-33822960 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 169
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 25, 226

Conread position: 640-862
Cow position: chr9:12337965-12337743 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 148
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 170, 9

Conread position: 641-861
Cow position: chr9:57131558-57131342 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 143, 0

Conread position: 641-862
Cow position: chr9:63361656-63361868 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 150
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 145, 0

Conread position: 651-862
Cow position: chr9:22440429-22440630 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 120, 62

Conread position: 651-862
Cow position: chr9:43159805-43159598 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 145
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 41, 22

Conread position: 651-864
Cow position: chr9:5104350-5104569 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 138, 75

Conread position: 653-860
Cow position: chr9:52518772-52518976 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 147
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 44, 107

Conread position: 661-862
Cow position: chr9:5342205-5342403 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 138
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 661-862
Cow position: chr9:21292364-21292564 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 137
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 36, 126

Conread position: 661-862
Cow position: chr9:22165670-22165874 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 111, 0

Conread position: 661-862
Cow position: chr9:59897632-59897439 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 663-862
Cow position: chr9:4241447-4241250 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 95, 122

Conread position: 663-864
Cow position: chr9:36628159-36627963 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 113, 0

Conread position: 664-864
Cow position: chr9:42586516-42586707 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 128, 0

Conread position: 672-862
Cow position: chr9:12773721-12773537 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 6, 0

Conread position: 675-862
Cow position: chr9:24079331-24079148 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 109, 0

Conread position: 680-862
Cow position: chr9:19718316-19718491 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 81, 74

Conread position: 680-862
Cow position: chr9:34707288-34707467 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 680-862
Cow position: chr9:40603692-40603510 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 129
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 35, 40

Conread position: 680-862
Cow position: chr9:42508856-42508671 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 53, 105

Conread position: 682-862
Cow position: chr9:26394328-26394505 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 686-862
Cow position: chr9:40984523-40984347 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 125, 99

Conread position: 687-862
Cow position: chr9:32052293-32052119 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 142, 97

Conread position: 688-862
Cow position: chr9:19771378-19771203 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 24, 36

Conread position: 715-862
Cow position: chr9:12269019-12268878 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 0

Show alignments to all cow chromosomes.