Cow genome map
Conread name: | Ss1.1-Pig4-TMW8025P08.5 |
Conread position: | 41-249 |
Cow position: | chr1:30672591-30672802 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 141 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 73-255 |
Cow position: | chr1:36528939-36529122 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 149 |
Alignm E-value: | 8.96831e-44 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 73-404 |
Cow position: | chr1:68334169-68333829 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 235 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 20, 189 |
Conread position: | 92-253 |
Cow position: | chr1:8844208-8844368 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 116 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 5, 0 |
Conread position: | 92-636 |
Cow position: | chr1:69996003-69996574 (view UCSC Genome Browser custom track) |
Alignm length: | 579 |
Alignm identity: | 364 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 173, 96 |
Conread position: | 94-216 |
Cow position: | chr1:50910765-50910643 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 98 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 94-216 |
Cow position: | chr1:79136975-79136851 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 100 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 22, 107 |
Conread position: | 94-233 |
Cow position: | chr1:33172105-33171967 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 106 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 103, 0 |
Conread position: | 94-233 |
Cow position: | chr1:48587489-48587350 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 108 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 73, 86 |
Conread position: | 94-235 |
Cow position: | chr1:69265450-69265591 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 107 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 47, 89 |
Conread position: | 94-246 |
Cow position: | chr1:87452522-87452371 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 121 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 89, 0 |
Conread position: | 94-248 |
Cow position: | chr1:43428053-43427897 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 118 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 11, 108 |
Conread position: | 94-249 |
Cow position: | chr1:10888445-10888287 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 123 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 119, 40 |
Conread position: | 94-251 |
Cow position: | chr1:42770417-42770257 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 125 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 94-252 |
Cow position: | chr1:15229441-15229601 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 119 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 119, 31 |
Conread position: | 94-254 |
Cow position: | chr1:83105616-83105776 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 129 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 94-255 |
Cow position: | chr1:6425939-6426100 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 126 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 94-255 |
Cow position: | chr1:13407090-13406926 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 128 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 107, 83 |
Conread position: | 94-255 |
Cow position: | chr1:16849297-16849458 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 129 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 94-255 |
Cow position: | chr1:26572653-26572492 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 126 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 94-255 |
Cow position: | chr1:42423270-42423431 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 132 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 104, 151 |
Conread position: | 94-255 |
Cow position: | chr1:44511203-44511031 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 128 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 94-255 |
Cow position: | chr1:73244268-73244429 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 122 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 94-255 |
Cow position: | chr1:73641553-73641395 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 129 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 94-255 |
Cow position: | chr1:74880606-74880446 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 126 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 120, 0 |
Conread position: | 94-255 |
Cow position: | chr1:74886846-74887003 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 125 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 107, 42 |
Conread position: | 94-255 |
Cow position: | chr1:74899825-74899663 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 118 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 12, 132 |
Conread position: | 94-255 |
Cow position: | chr1:85527396-85527234 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 136 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 94-258 |
Cow position: | chr1:9521599-9521434 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 126 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 29, 98 |
Conread position: | 94-258 |
Cow position: | chr1:43221280-43221119 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 127 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 121, 0 |
Conread position: | 94-258 |
Cow position: | chr1:91076142-91076303 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 129 |
Alignm E-value: | 9e-33 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 94-261 |
Cow position: | chr1:3615001-3614834 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 123 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 94-417 |
Cow position: | chr1:13269381-13269046 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 224 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 181, 120 |
Conread position: | 94-417 |
Cow position: | chr1:50593481-50593816 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 229 |
Alignm E-value: | 6e-40 |
Alignm gaps (pig, cow): | 181, 0 |
Conread position: | 94-417 |
Cow position: | chr1:53250028-53249698 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 226 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 181, 21 |
Conread position: | 94-417 |
Cow position: | chr1:56652552-56652226 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 219 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 171, 31 |
Conread position: | 94-421 |
Cow position: | chr1:31969275-31968939 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 228 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 171, 94 |
Conread position: | 94-435 |
Cow position: | chr1:25263361-25263690 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 228 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 165, 122 |
Conread position: | 94-625 |
Cow position: | chr1:71599534-71598988 (view UCSC Genome Browser custom track) |
Alignm length: | 561 |
Alignm identity: | 363 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 75, 28 |
Conread position: | 94-638 |
Cow position: | chr1:50371050-50370476 (view UCSC Genome Browser custom track) |
Alignm length: | 577 |
Alignm identity: | 381 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 171, 165 |
Conread position: | 94-643 |
Cow position: | chr1:74397404-74397980 (view UCSC Genome Browser custom track) |
Alignm length: | 585 |
Alignm identity: | 379 |
Alignm E-value: | 6e-40 |
Alignm gaps (pig, cow): | 151, 43 |
Conread position: | 94-643 |
Cow position: | chr1:100065659-100065091 (view UCSC Genome Browser custom track) |
Alignm length: | 580 |
Alignm identity: | 368 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 217, 12 |
Conread position: | 95-255 |
Cow position: | chr1:7637049-7637207 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 121 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 37, 66 |
Conread position: | 95-255 |
Cow position: | chr1:80714093-80713933 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 124 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 95-407 |
Cow position: | chr1:12429877-12429577 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 205 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 111, 12 |
Conread position: | 95-413 |
Cow position: | chr1:90101244-90100913 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 227 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 170, 164 |
Conread position: | 96-224 |
Cow position: | chr1:52219023-52219151 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 102 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 55, 94 |
Conread position: | 96-225 |
Cow position: | chr1:19437555-19437426 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 97 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 96-235 |
Cow position: | chr1:11895719-11895580 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 104 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 96-243 |
Cow position: | chr1:80670584-80670727 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 111 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 96-248 |
Cow position: | chr1:66914043-66914195 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 119 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 96-250 |
Cow position: | chr1:31158783-31158629 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 112 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 75, 85 |
Conread position: | 96-255 |
Cow position: | chr1:15492130-15491975 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 125 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 51, 121 |
Conread position: | 96-255 |
Cow position: | chr1:25355349-25355513 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 120 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 91, 0 |
Conread position: | 96-255 |
Cow position: | chr1:40579553-40579712 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 119 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 96-255 |
Cow position: | chr1:47294908-47295067 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 118 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 96-255 |
Cow position: | chr1:78300293-78300134 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 127 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 97-249 |
Cow position: | chr1:41277368-41277216 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 114 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 97-255 |
Cow position: | chr1:20046012-20046169 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 128 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 134, 0 |
Conread position: | 97-255 |
Cow position: | chr1:30912401-30912558 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 118 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 80, 0 |
Conread position: | 98-249 |
Cow position: | chr1:38266407-38266255 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 119 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 78, 83 |
Conread position: | 98-254 |
Cow position: | chr1:73914480-73914323 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 131 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 62, 120 |
Conread position: | 98-255 |
Cow position: | chr1:37556223-37556379 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 116 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 100, 14 |
Conread position: | 98-417 |
Cow position: | chr1:63023712-63023387 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 220 |
Alignm E-value: | 9e-33 |
Alignm gaps (pig, cow): | 32, 202 |
Conread position: | 98-666 |
Cow position: | chr1:75904282-75903699 (view UCSC Genome Browser custom track) |
Alignm length: | 593 |
Alignm identity: | 371 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 79, 309 |
Conread position: | 99-418 |
Cow position: | chr1:43519865-43519535 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 221 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 218, 204 |
Conread position: | 100-255 |
Cow position: | chr1:71346938-71346784 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 115 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 105, 21 |
Conread position: | 105-250 |
Cow position: | chr1:41268459-41268604 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 110 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 140, 67 |
Conread position: | 105-255 |
Cow position: | chr1:55435213-55435065 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 116 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 111, 0 |
Conread position: | 109-638 |
Cow position: | chr1:83648004-83647452 (view UCSC Genome Browser custom track) |
Alignm length: | 557 |
Alignm identity: | 352 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 166, 454 |
Conread position: | 112-235 |
Cow position: | chr1:95786964-95786841 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 95 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 112-255 |
Cow position: | chr1:100029990-100030133 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 105 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 114-264 |
Cow position: | chr1:46335876-46336024 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 111 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 84, 0 |
Conread position: | 114-414 |
Cow position: | chr1:99438610-99438306 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 209 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 151, 11 |
Conread position: | 115-251 |
Cow position: | chr1:9683299-9683168 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 104 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 125-255 |
Cow position: | chr1:80128268-80128393 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 102 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 146-253 |
Cow position: | chr1:26954819-26954714 (view UCSC Genome Browser custom track) |
Alignm length: | 108 |
Alignm identity: | 88 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 157-435 |
Cow position: | chr1:69210607-69210333 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 189 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 135, 74 |
Conread position: | 274-640 |
Cow position: | chr1:20046219-20046591 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 242 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 52, 193 |
Show alignments to all cow chromosomes.