Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8025P08.5 |
| Conread position: | 66-417 |
| Cow position: | chr10:56451560-56451922 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 241 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 8, 126 |
| Conread position: | 94-234 |
| Cow position: | chr10:16840333-16840473 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 94-249 |
| Cow position: | chr10:3327201-3327352 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 94-249 |
| Cow position: | chr10:22152505-22152658 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 94-249 |
| Cow position: | chr10:58106756-58106909 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 94-253 |
| Cow position: | chr10:22268441-22268287 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 94-254 |
| Cow position: | chr10:39265450-39265610 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 94-255 |
| Cow position: | chr10:16583775-16583617 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 94-255 |
| Cow position: | chr10:21023299-21023144 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 94-255 |
| Cow position: | chr10:43163936-43163789 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 94-255 |
| Cow position: | chr10:47994881-47994725 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 22, 44 |
| Conread position: | 94-255 |
| Cow position: | chr10:56091042-56091202 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 94-255 |
| Cow position: | chr10:63850141-63850304 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 130, 12 |
| Conread position: | 94-407 |
| Cow position: | chr10:48883298-48883609 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 154, 135 |
| Conread position: | 94-412 |
| Cow position: | chr10:1442500-1442171 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 188, 135 |
| Conread position: | 94-417 |
| Cow position: | chr10:49836118-49836439 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 88, 13 |
| Conread position: | 94-417 |
| Cow position: | chr10:66353914-66353579 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 216 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 161, 107 |
| Conread position: | 94-629 |
| Cow position: | chr10:26692365-26692932 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 371 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 165, 104 |
| Conread position: | 95-255 |
| Cow position: | chr10:9100926-9100764 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 95-258 |
| Cow position: | chr10:39835712-39835554 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 95-258 |
| Cow position: | chr10:39837905-39837747 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 96-249 |
| Cow position: | chr10:25922908-25923060 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 96-251 |
| Cow position: | chr10:9608585-9608429 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 96-255 |
| Cow position: | chr10:16061887-16062047 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 93, 65 |
| Conread position: | 96-255 |
| Cow position: | chr10:28718133-28718292 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 96-255 |
| Cow position: | chr10:39380263-39380105 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 96-255 |
| Cow position: | chr10:51762430-51762272 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 96-255 |
| Cow position: | chr10:61506617-61506775 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 96-258 |
| Cow position: | chr10:12938020-12938181 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 99-264 |
| Cow position: | chr10:49931181-49931018 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 13, 36 |
| Conread position: | 100-247 |
| Cow position: | chr10:61882476-61882625 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 100-251 |
| Cow position: | chr10:55401941-55401790 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 100-255 |
| Cow position: | chr10:25631676-25631829 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 102-255 |
| Cow position: | chr10:24336853-24337006 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 103-413 |
| Cow position: | chr10:23542999-23542683 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 216 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 204, 21 |
| Conread position: | 114-416 |
| Cow position: | chr10:61679916-61679600 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 7, 74 |
| Conread position: | 117-249 |
| Cow position: | chr10:49876905-49876773 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 120-638 |
| Cow position: | chr10:53204014-53204558 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 352 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 145, 139 |
| Conread position: | 121-417 |
| Cow position: | chr10:24959861-24959554 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 159, 78 |
| Conread position: | 128-255 |
| Cow position: | chr10:35552749-35552876 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 129-264 |
| Cow position: | chr10:33218101-33217967 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 268-599 |
| Cow position: | chr10:35553111-35553436 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 171, 16 |
| Conread position: | 274-648 |
| Cow position: | chr10:15841584-15841212 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 241 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 141, 204 |
Show alignments to all cow chromosomes.