Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8025P08.5 |
| Conread position: | 94-237 |
| Cow position: | chr12:15878096-15878237 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 94-247 |
| Cow position: | chr12:10791723-10791877 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 21, 32 |
| Conread position: | 94-254 |
| Cow position: | chr12:20433219-20433060 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 113, 83 |
| Conread position: | 94-255 |
| Cow position: | chr12:7096470-7096312 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 94-255 |
| Cow position: | chr12:8106486-8106656 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 94-255 |
| Cow position: | chr12:14752955-14752798 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 94-255 |
| Cow position: | chr12:22134050-22133890 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 94-255 |
| Cow position: | chr12:34876514-34876679 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 94-255 |
| Cow position: | chr12:45121043-45121207 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 71, 133 |
| Conread position: | 94-265 |
| Cow position: | chr12:5480192-5480023 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 94-380 |
| Cow position: | chr12:32237541-32237251 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 171, 86 |
| Conread position: | 94-630 |
| Cow position: | chr12:41088718-41088149 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 359 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 102, 71 |
| Conread position: | 94-637 |
| Cow position: | chr12:8556335-8556900 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 355 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 165, 59 |
| Conread position: | 94-638 |
| Cow position: | chr12:25380538-25379981 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 362 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 135, 44 |
| Conread position: | 95-255 |
| Cow position: | chr12:45476364-45476211 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 95-258 |
| Cow position: | chr12:41227985-41228145 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 96-249 |
| Cow position: | chr12:3034452-3034301 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 100-251 |
| Cow position: | chr12:13975303-13975447 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 101-644 |
| Cow position: | chr12:1239105-1238549 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 347 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 147, 171 |
| Conread position: | 105-241 |
| Cow position: | chr12:25940454-25940318 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 105-252 |
| Cow position: | chr12:20638245-20638390 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 112-255 |
| Cow position: | chr12:23027327-23027467 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 112-637 |
| Cow position: | chr12:30131474-30132029 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 359 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 111, 26 |
| Conread position: | 114-265 |
| Cow position: | chr12:43265623-43265773 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 136-403 |
| Cow position: | chr12:1696700-1696423 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 32, 52 |
| Conread position: | 413-760 |
| Cow position: | chr12:34659040-34658694 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 36, 54 |
Show alignments to all cow chromosomes.