Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8025P08.5 |
| Conread position: | 79-264 |
| Cow position: | chr13:7547632-7547813 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 19, 12 |
| Conread position: | 92-413 |
| Cow position: | chr13:55964445-55964774 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 224 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 10, 282 |
| Conread position: | 94-251 |
| Cow position: | chr13:31656810-31656656 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 135 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 94-251 |
| Cow position: | chr13:35897686-35897838 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 94-253 |
| Cow position: | chr13:15882825-15882668 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 94-254 |
| Cow position: | chr13:21588051-21588209 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 94-255 |
| Cow position: | chr13:6900430-6900271 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 94-255 |
| Cow position: | chr13:9398572-9398413 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 94-255 |
| Cow position: | chr13:23207453-23207295 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 94-255 |
| Cow position: | chr13:26259769-26259930 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 94-255 |
| Cow position: | chr13:28740034-28740192 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 104, 84 |
| Conread position: | 94-255 |
| Cow position: | chr13:30930232-30930393 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 94-255 |
| Cow position: | chr13:31656638-31656479 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 94-255 |
| Cow position: | chr13:41566648-41566487 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 94-255 |
| Cow position: | chr13:49675720-49675563 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 94-255 |
| Cow position: | chr13:61081620-61081459 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 130, 41 |
| Conread position: | 94-258 |
| Cow position: | chr13:15336756-15336915 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 94-264 |
| Cow position: | chr13:5292421-5292252 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 94-331 |
| Cow position: | chr13:571361-571595 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 137, 101 |
| Conread position: | 94-345 |
| Cow position: | chr13:34016641-34016379 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 94-417 |
| Cow position: | chr13:62595034-62594698 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 223 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 187, 0 |
| Conread position: | 94-624 |
| Cow position: | chr13:17776844-17777398 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 359 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 29, 348 |
| Conread position: | 94-626 |
| Cow position: | chr13:13289476-13288961 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 361 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 165, 238 |
| Conread position: | 94-648 |
| Cow position: | chr13:22569133-22568548 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 163 |
| Conread position: | 95-255 |
| Cow position: | chr13:54242321-54242160 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 18, 78 |
| Conread position: | 96-251 |
| Cow position: | chr13:26633213-26633369 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 96-255 |
| Cow position: | chr13:395001-395160 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 97-255 |
| Cow position: | chr13:4466777-4466936 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 98-255 |
| Cow position: | chr13:35766513-35766668 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 98-623 |
| Cow position: | chr13:33710002-33710545 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 345 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 151, 17 |
| Conread position: | 100-264 |
| Cow position: | chr13:34094386-34094224 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 102-255 |
| Cow position: | chr13:38535650-38535499 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 30, 91 |
| Conread position: | 103-255 |
| Cow position: | chr13:38625738-38625888 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 107-255 |
| Cow position: | chr13:30270291-30270144 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 112-255 |
| Cow position: | chr13:42295859-42296000 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 118-255 |
| Cow position: | chr13:6736317-6736183 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 128-255 |
| Cow position: | chr13:8334679-8334552 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 468-638 |
| Cow position: | chr13:34729894-34729725 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 27, 0 |
Show alignments to all cow chromosomes.