Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8025P08.5 |
| Conread position: | 83-258 |
| Cow position: | chr14:43902819-43902992 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 90-255 |
| Cow position: | chr14:6843470-6843305 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 11, 37 |
| Conread position: | 92-255 |
| Cow position: | chr14:31784376-31784541 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 138, 46 |
| Conread position: | 94-250 |
| Cow position: | chr14:48273940-48274096 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 143, 26 |
| Conread position: | 94-251 |
| Cow position: | chr14:38739734-38739578 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 41, 96 |
| Conread position: | 94-251 |
| Cow position: | chr14:41981688-41981845 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 107, 67 |
| Conread position: | 94-255 |
| Cow position: | chr14:6352813-6352653 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 94-255 |
| Cow position: | chr14:12688864-12689020 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 94-255 |
| Cow position: | chr14:13932086-13931926 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 94-255 |
| Cow position: | chr14:17921183-17921025 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 94-255 |
| Cow position: | chr14:22657469-22657629 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 94-255 |
| Cow position: | chr14:24966228-24966069 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 94-255 |
| Cow position: | chr14:31914628-31914799 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 94-255 |
| Cow position: | chr14:31946568-31946406 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 94-255 |
| Cow position: | chr14:33281131-33280969 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 94-255 |
| Cow position: | chr14:35322569-35322724 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 94-255 |
| Cow position: | chr14:36174454-36174614 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 28, 47 |
| Conread position: | 94-255 |
| Cow position: | chr14:39341214-39341374 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 94-257 |
| Cow position: | chr14:40253013-40252850 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 94-326 |
| Cow position: | chr14:12801763-12801516 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 94-355 |
| Cow position: | chr14:43180670-43180401 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 30, 129 |
| Conread position: | 96-249 |
| Cow position: | chr14:18531463-18531615 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 96-254 |
| Cow position: | chr14:11756505-11756665 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 96-254 |
| Cow position: | chr14:33962935-33962778 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 96-255 |
| Cow position: | chr14:1734852-1734693 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 96-421 |
| Cow position: | chr14:9567820-9567498 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 77, 156 |
| Conread position: | 99-255 |
| Cow position: | chr14:13836948-13837103 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 99-265 |
| Cow position: | chr14:14114729-14114893 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 100-258 |
| Cow position: | chr14:35088480-35088326 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 100-636 |
| Cow position: | chr14:23676946-23676402 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 336 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 133, 89 |
| Conread position: | 105-255 |
| Cow position: | chr14:45118577-45118728 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 60, 100 |
| Conread position: | 107-258 |
| Cow position: | chr14:31494299-31494148 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 108-255 |
| Cow position: | chr14:41511582-41511729 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 112-252 |
| Cow position: | chr14:31966035-31965899 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 112-255 |
| Cow position: | chr14:34148626-34148484 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 120-416 |
| Cow position: | chr14:37123439-37123138 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 145, 5 |
| Conread position: | 274-627 |
| Cow position: | chr14:18014226-18013864 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 241 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 123, 86 |
| Conread position: | 417-638 |
| Cow position: | chr14:43180267-43180056 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 22, 49 |
Show alignments to all cow chromosomes.