Cow genome map

Conread name: Ss1.1-Pig4-TMW8025P08.5

Conread position: 72-418
Cow position: chr15:9038527-9038168 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 228
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 26, 113

Conread position: 79-412
Cow position: chr15:11612542-11612880 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 227
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 30, 19

Conread position: 92-255
Cow position: chr15:7583952-7583797 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 91, 34

Conread position: 94-247
Cow position: chr15:26322843-26322694 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 42, 105

Conread position: 94-254
Cow position: chr15:14719443-14719596 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 94-254
Cow position: chr15:46639512-46639353 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 86, 0

Conread position: 94-255
Cow position: chr15:9390543-9390705 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 130
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 94, 0

Conread position: 94-255
Cow position: chr15:13135165-13135004 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 128
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 94-255
Cow position: chr15:25660824-25660663 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 136
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 22, 33

Conread position: 94-255
Cow position: chr15:28038354-28038199 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 127, 0

Conread position: 94-255
Cow position: chr15:29813480-29813635 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 94-255
Cow position: chr15:31944494-31944657 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 105, 0

Conread position: 94-255
Cow position: chr15:43640656-43640815 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 132
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 102, 0

Conread position: 94-264
Cow position: chr15:36298638-36298469 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 165, 0

Conread position: 94-332
Cow position: chr15:264013-264259 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 169
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 140, 107

Conread position: 94-334
Cow position: chr15:9660766-9660506 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 197
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 121, 0

Conread position: 94-407
Cow position: chr15:26596669-26596344 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 221
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 89, 26

Conread position: 94-413
Cow position: chr15:9046314-9046640 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 230
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 56, 183

Conread position: 94-413
Cow position: chr15:12962925-12962599 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 229
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 171, 18

Conread position: 94-415
Cow position: chr15:13536830-13536503 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 222
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 165, 26

Conread position: 94-417
Cow position: chr15:7311625-7311953 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 228
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 172, 57

Conread position: 94-557
Cow position: chr15:41148418-41148891 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 165

Conread position: 94-629
Cow position: chr15:38608381-38607866 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 358
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 74, 47

Conread position: 95-255
Cow position: chr15:7662775-7662614 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 128
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 118, 0

Conread position: 95-643
Cow position: chr15:19708137-19707573 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 364
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 33, 147

Conread position: 96-249
Cow position: chr15:16486475-16486628 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 96-255
Cow position: chr15:11684785-11684942 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 96-255
Cow position: chr15:14411554-14411713 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 80, 106

Conread position: 96-255
Cow position: chr15:45620228-45620387 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 96-255
Cow position: chr15:48288248-48288406 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 125
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 105, 0

Conread position: 96-265
Cow position: chr15:42645602-42645437 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 96-417
Cow position: chr15:21299274-21299614 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 228
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 83, 108

Conread position: 97-241
Cow position: chr15:9369022-9369166 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 97-258
Cow position: chr15:50948736-50948573 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 85, 105

Conread position: 97-638
Cow position: chr15:33268295-33267744 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 352
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 300, 81

Conread position: 98-255
Cow position: chr15:18370260-18370416 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 98-255
Cow position: chr15:47363954-47364111 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 81, 62

Conread position: 98-417
Cow position: chr15:9133255-9133576 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 218
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 39, 123

Conread position: 100-251
Cow position: chr15:8055936-8056085 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 75, 88

Conread position: 100-255
Cow position: chr15:928256-928102 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 126
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 88, 0

Conread position: 104-251
Cow position: chr15:46550691-46550547 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 122
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 106, 0

Conread position: 105-255
Cow position: chr15:37714492-37714644 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 111
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 106-491
Cow position: chr15:22238729-22238330 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 262
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 176, 83

Conread position: 107-255
Cow position: chr15:45152868-45152721 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 94, 0

Conread position: 114-255
Cow position: chr15:21809060-21809197 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 83, 0

Conread position: 117-255
Cow position: chr15:34275088-34275226 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 117-255
Cow position: chr15:48009737-48009871 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 122-255
Cow position: chr15:42632648-42632515 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 100
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 122-258
Cow position: chr15:11789097-11789231 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 111
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 67, 0

Conread position: 126-416
Cow position: chr15:151338-151615 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 197
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 178, 58

Conread position: 274-638
Cow position: chr15:42211651-42211290 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 237
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 137, 84

Conread position: 346-638
Cow position: chr15:35139177-35139478 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 201
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 74, 109

Conread position: 413-627
Cow position: chr15:39293588-39293367 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 152
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 32, 26

Conread position: 413-643
Cow position: chr15:29596962-29597196 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 167
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 31, 26

Show alignments to all cow chromosomes.