Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8025P08.5 |
| Conread position: | 62-255 |
| Cow position: | chr18:32226016-32226212 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 11, 123 |
| Conread position: | 91-626 |
| Cow position: | chr18:24399132-24398571 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 368 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 174, 34 |
| Conread position: | 92-249 |
| Cow position: | chr18:41391340-41391496 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 94-242 |
| Cow position: | chr18:8287752-8287607 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 32, 9 |
| Conread position: | 94-245 |
| Cow position: | chr18:6424800-6424647 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 94-250 |
| Cow position: | chr18:13907246-13907089 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 34, 143 |
| Conread position: | 94-251 |
| Cow position: | chr18:14153009-14153166 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 94-253 |
| Cow position: | chr18:20755334-20755175 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 94-253 |
| Cow position: | chr18:51031882-51031723 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 94-255 |
| Cow position: | chr18:3832272-3832433 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 133, 137 |
| Conread position: | 94-255 |
| Cow position: | chr18:21236605-21236445 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 94-255 |
| Cow position: | chr18:24587073-24586918 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 117, 31 |
| Conread position: | 94-255 |
| Cow position: | chr18:26503755-26503593 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 23, 59 |
| Conread position: | 94-255 |
| Cow position: | chr18:33373324-33373485 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 94-258 |
| Cow position: | chr18:36414465-36414629 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 15, 32 |
| Conread position: | 94-405 |
| Cow position: | chr18:42757229-42757544 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 161, 57 |
| Conread position: | 94-417 |
| Cow position: | chr18:19534736-19534407 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 222 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 171, 160 |
| Conread position: | 94-629 |
| Cow position: | chr18:46850155-46850709 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 344 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 56, 49 |
| Conread position: | 95-255 |
| Cow position: | chr18:9760395-9760234 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 156, 75 |
| Conread position: | 95-255 |
| Cow position: | chr18:16658958-16658798 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 97-257 |
| Cow position: | chr18:29523046-29523204 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 98-255 |
| Cow position: | chr18:25287539-25287697 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 98-265 |
| Cow position: | chr18:36785168-36785335 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 99-255 |
| Cow position: | chr18:37608716-37608560 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 100-254 |
| Cow position: | chr18:10101781-10101932 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 100-255 |
| Cow position: | chr18:17153329-17153483 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 100-255 |
| Cow position: | chr18:52803355-52803508 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 71, 24 |
| Conread position: | 111-333 |
| Cow position: | chr18:2028754-2028985 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 127, 223 |
| Conread position: | 112-255 |
| Cow position: | chr18:14318030-14317888 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 114-255 |
| Cow position: | chr18:253038-253176 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 87, 24 |
| Conread position: | 117-255 |
| Cow position: | chr18:54790734-54790872 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 118-432 |
| Cow position: | chr18:28665584-28665910 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 213 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 5, 144 |
| Conread position: | 122-255 |
| Cow position: | chr18:40704237-40704370 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 126-247 |
| Cow position: | chr18:17409445-17409324 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 130-255 |
| Cow position: | chr18:17762955-17762830 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 280-637 |
| Cow position: | chr18:42590889-42591248 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 29, 119 |
| Conread position: | 427-629 |
| Cow position: | chr18:38360694-38360494 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 22, 55 |
Show alignments to all cow chromosomes.