Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8025P08.5 |
| Conread position: | 79-235 |
| Cow position: | chr21:34174686-34174530 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 122, 13 |
| Conread position: | 94-229 |
| Cow position: | chr21:2812555-2812420 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 94-252 |
| Cow position: | chr21:44873166-44873008 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 57, 34 |
| Conread position: | 94-255 |
| Cow position: | chr21:1078817-1078971 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 94-255 |
| Cow position: | chr21:9254077-9254235 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 98, 70 |
| Conread position: | 94-255 |
| Cow position: | chr21:9988224-9988064 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 94-255 |
| Cow position: | chr21:13090936-13091095 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 126, 47 |
| Conread position: | 94-255 |
| Cow position: | chr21:14153267-14153423 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 94-255 |
| Cow position: | chr21:33653393-33653552 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 94-255 |
| Cow position: | chr21:35998945-35999104 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 94-255 |
| Cow position: | chr21:37613566-37613727 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 94-258 |
| Cow position: | chr21:20183989-20184156 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 33, 50 |
| Conread position: | 94-264 |
| Cow position: | chr21:47663041-47663208 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 95-264 |
| Cow position: | chr21:26564219-26564056 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 96-249 |
| Cow position: | chr21:17794602-17794452 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 96-255 |
| Cow position: | chr21:14745294-14745450 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 96-255 |
| Cow position: | chr21:19652508-19652349 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 96-255 |
| Cow position: | chr21:21290556-21290400 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 96-539 |
| Cow position: | chr21:28660819-28660365 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 300 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 163, 64 |
| Conread position: | 97-255 |
| Cow position: | chr21:17031578-17031426 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 56, 75 |
| Conread position: | 98-255 |
| Cow position: | chr21:3761940-3761790 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 98-255 |
| Cow position: | chr21:45910240-45910083 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 98-379 |
| Cow position: | chr21:6174779-6175072 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 167, 161 |
| Conread position: | 100-255 |
| Cow position: | chr21:10093732-10093884 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 100-255 |
| Cow position: | chr21:45639335-45639180 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 105-417 |
| Cow position: | chr21:48623457-48623767 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 53, 17 |
| Conread position: | 108-253 |
| Cow position: | chr21:36466185-36466336 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 108-255 |
| Cow position: | chr21:32394010-32393862 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 108-255 |
| Cow position: | chr21:37087345-37087492 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 113-258 |
| Cow position: | chr21:8639362-8639508 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 34, 90 |
| Conread position: | 119-255 |
| Cow position: | chr21:46241583-46241446 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 127-629 |
| Cow position: | chr21:29421623-29422106 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 331 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 37, 135 |
| Conread position: | 276-629 |
| Cow position: | chr21:18998615-18998262 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 122, 49 |
| Conread position: | 411-638 |
| Cow position: | chr21:30391645-30391409 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 52, 159 |
| Conread position: | 413-629 |
| Cow position: | chr21:40285614-40285829 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 87, 39 |
Show alignments to all cow chromosomes.