Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8025P08.5 |
| Conread position: | 66-251 |
| Cow position: | chr22:6927587-6927771 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 7, 84 |
| Conread position: | 73-250 |
| Cow position: | chr22:12446135-12446309 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 74, 5 |
| Conread position: | 73-255 |
| Cow position: | chr22:8592878-8592700 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 25, 5 |
| Conread position: | 73-255 |
| Cow position: | chr22:38317146-38316961 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 17, 95 |
| Conread position: | 94-221 |
| Cow position: | chr22:18527079-18527204 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 94-223 |
| Cow position: | chr22:2884937-2885063 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 94-247 |
| Cow position: | chr22:43093402-43093561 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 94-255 |
| Cow position: | chr22:11659131-11658966 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 30, 87 |
| Conread position: | 94-255 |
| Cow position: | chr22:12595256-12595415 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 94-255 |
| Cow position: | chr22:19941798-19941638 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 120, 94 |
| Conread position: | 94-255 |
| Cow position: | chr22:47566126-47565963 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 60, 28 |
| Conread position: | 94-258 |
| Cow position: | chr22:652973-652811 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 94-416 |
| Cow position: | chr22:31111153-31111461 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 217 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 197, 31 |
| Conread position: | 94-417 |
| Cow position: | chr22:6948001-6948335 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 171, 14 |
| Conread position: | 94-418 |
| Cow position: | chr22:5038326-5038662 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 240 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 171, 60 |
| Conread position: | 94-616 |
| Cow position: | chr22:16677556-16678106 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 353 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 90, 78 |
| Conread position: | 95-258 |
| Cow position: | chr22:13864455-13864291 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 95-258 |
| Cow position: | chr22:27203677-27203504 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 55, 50 |
| Conread position: | 96-249 |
| Cow position: | chr22:34016950-34016798 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 96-258 |
| Cow position: | chr22:31154591-31154428 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 96-298 |
| Cow position: | chr22:20931527-20931723 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 45, 56 |
| Conread position: | 96-643 |
| Cow position: | chr22:42840903-42840341 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 31 |
| Conread position: | 97-410 |
| Cow position: | chr22:41491050-41491369 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 215 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 168, 87 |
| Conread position: | 100-255 |
| Cow position: | chr22:44092301-44092151 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 108-255 |
| Cow position: | chr22:23951125-23950981 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 116-253 |
| Cow position: | chr22:44394976-44394838 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 116-255 |
| Cow position: | chr22:37710682-37710544 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 85, 23 |
| Conread position: | 274-589 |
| Cow position: | chr22:12381042-12381356 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 54, 91 |
| Conread position: | 274-638 |
| Cow position: | chr22:40031595-40031963 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 239 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 106, 124 |
| Conread position: | 411-627 |
| Cow position: | chr22:34211200-34210984 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 21, 79 |
| Conread position: | 413-636 |
| Cow position: | chr22:35721962-35722186 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 36, 73 |
Show alignments to all cow chromosomes.