Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8025P08.5 |
| Conread position: | 92-255 |
| Cow position: | chr29:12913880-12914043 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 70, 83 |
| Conread position: | 94-196 |
| Cow position: | chr29:16727221-16727119 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 94-249 |
| Cow position: | chr29:34287507-34287354 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 94-249 |
| Cow position: | chr29:45804953-45804798 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 94-251 |
| Cow position: | chr29:23001049-23000893 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 151, 95 |
| Conread position: | 94-254 |
| Cow position: | chr29:1994580-1994733 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 94-255 |
| Cow position: | chr29:12575880-12576040 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 94-255 |
| Cow position: | chr29:19400349-19400501 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 94-255 |
| Cow position: | chr29:37438868-37439026 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 94-264 |
| Cow position: | chr29:5363786-5363621 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 94-264 |
| Cow position: | chr29:6437705-6437873 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 94-264 |
| Cow position: | chr29:25117460-25117290 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 137, 107 |
| Conread position: | 94-264 |
| Cow position: | chr29:39432608-39432446 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 94-269 |
| Cow position: | chr29:42100661-42100829 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 154, 59 |
| Conread position: | 94-413 |
| Cow position: | chr29:33101781-33102122 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 6, 162 |
| Conread position: | 94-413 |
| Cow position: | chr29:35227294-35226979 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 171, 165 |
| Conread position: | 94-417 |
| Cow position: | chr29:3675421-3675755 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 171, 9 |
| Conread position: | 94-417 |
| Cow position: | chr29:5053640-5053306 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 171, 9 |
| Conread position: | 94-418 |
| Cow position: | chr29:27495041-27494703 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 35, 95 |
| Conread position: | 94-630 |
| Cow position: | chr29:10135891-10135338 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 348 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 197, 96 |
| Conread position: | 96-255 |
| Cow position: | chr29:39293341-39293179 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 98-255 |
| Cow position: | chr29:43997872-43998029 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 99-418 |
| Cow position: | chr29:320675-320348 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 73, 38 |
| Conread position: | 101-255 |
| Cow position: | chr29:20923330-20923177 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 102-254 |
| Cow position: | chr29:28785157-28785313 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 104-255 |
| Cow position: | chr29:27710617-27710464 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 105-257 |
| Cow position: | chr29:22989733-22989577 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 112-249 |
| Cow position: | chr29:27305858-27305994 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 114-418 |
| Cow position: | chr29:31472009-31471707 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 145, 11 |
| Conread position: | 119-257 |
| Cow position: | chr29:13071636-13071770 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 127-255 |
| Cow position: | chr29:20709926-20710052 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 282-643 |
| Cow position: | chr29:14025518-14025157 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 239 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 103, 84 |
| Conread position: | 451-636 |
| Cow position: | chr29:26239887-26239699 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 102, 7 |
Show alignments to all cow chromosomes.