Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8025P08.5 |
| Conread position: | 35-249 |
| Cow position: | chr7:58384326-58384108 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 15, 56 |
| Conread position: | 66-255 |
| Cow position: | chr7:59086642-59086831 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 7, 64 |
| Conread position: | 78-255 |
| Cow position: | chr7:42505815-42505993 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 94-249 |
| Cow position: | chr7:25015786-25015632 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 94-253 |
| Cow position: | chr7:63121025-63120867 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 94-255 |
| Cow position: | chr7:8605329-8605494 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 138, 107 |
| Conread position: | 94-255 |
| Cow position: | chr7:11908093-11908254 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 94-255 |
| Cow position: | chr7:25024493-25024333 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 94-255 |
| Cow position: | chr7:53018353-53018514 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 94-255 |
| Cow position: | chr7:54655880-54655711 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 94-255 |
| Cow position: | chr7:61434848-61435007 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 117, 60 |
| Conread position: | 94-255 |
| Cow position: | chr7:67630310-67630148 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 94-264 |
| Cow position: | chr7:24963110-24963281 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 38, 167 |
| Conread position: | 94-332 |
| Cow position: | chr7:43303004-43303233 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 94-417 |
| Cow position: | chr7:20768737-20768407 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 63, 27 |
| Conread position: | 95-253 |
| Cow position: | chr7:13649492-13649640 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 96-255 |
| Cow position: | chr7:15572312-15572468 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 149, 32 |
| Conread position: | 97-249 |
| Cow position: | chr7:26722236-26722085 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 72, 86 |
| Conread position: | 97-255 |
| Cow position: | chr7:21875844-21875689 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 97-255 |
| Cow position: | chr7:54895410-54895252 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 98-254 |
| Cow position: | chr7:5890499-5890650 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 109, 35 |
| Conread position: | 98-255 |
| Cow position: | chr7:1548757-1548602 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 73, 85 |
| Conread position: | 98-255 |
| Cow position: | chr7:29373142-29372987 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 98-255 |
| Cow position: | chr7:34758044-34758202 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 99-241 |
| Cow position: | chr7:37783193-37783050 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 102-253 |
| Cow position: | chr7:494410-494562 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 103-249 |
| Cow position: | chr7:36687561-36687417 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 105-259 |
| Cow position: | chr7:61082526-61082680 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 105, 94 |
| Conread position: | 107-255 |
| Cow position: | chr7:9190567-9190714 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 110-255 |
| Cow position: | chr7:69083363-69083505 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 111-255 |
| Cow position: | chr7:61358186-61358329 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 115-238 |
| Cow position: | chr7:54295428-54295550 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 17, 78 |
| Conread position: | 144-412 |
| Cow position: | chr7:11168475-11168196 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 192 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 121, 115 |
| Conread position: | 274-627 |
| Cow position: | chr7:38254871-38255224 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 123, 198 |
Show alignments to all cow chromosomes.