Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8025P08.5 |
| Conread position: | 1-255 |
| Cow position: | chr8:58635945-58635690 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 0 |
| Conread position: | 66-254 |
| Cow position: | chr8:25135972-25136162 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 11, 15 |
| Conread position: | 69-348 |
| Cow position: | chr8:24671412-24671129 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 104, 152 |
| Conread position: | 93-258 |
| Cow position: | chr8:6820881-6820720 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 94-221 |
| Cow position: | chr8:54170565-54170439 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 94-222 |
| Cow position: | chr8:39635933-39636063 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 94-248 |
| Cow position: | chr8:37240540-37240692 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 77, 18 |
| Conread position: | 94-251 |
| Cow position: | chr8:38895706-38895862 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 63, 16 |
| Conread position: | 94-253 |
| Cow position: | chr8:3088478-3088321 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 94-253 |
| Cow position: | chr8:36709659-36709502 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 94-255 |
| Cow position: | chr8:11302258-11302420 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 110, 94 |
| Conread position: | 94-255 |
| Cow position: | chr8:25610820-25610659 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 28, 97 |
| Conread position: | 94-255 |
| Cow position: | chr8:31208655-31208491 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 102, 26 |
| Conread position: | 94-255 |
| Cow position: | chr8:37998633-37998469 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 76, 9 |
| Conread position: | 94-255 |
| Cow position: | chr8:45072592-45072754 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 94-255 |
| Cow position: | chr8:61576828-61576672 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 94-260 |
| Cow position: | chr8:39619687-39619854 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 113, 95 |
| Conread position: | 94-413 |
| Cow position: | chr8:55736736-55736428 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 94-417 |
| Cow position: | chr8:30105563-30105896 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 158, 90 |
| Conread position: | 94-424 |
| Cow position: | chr8:23927729-23927391 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 181, 30 |
| Conread position: | 94-615 |
| Cow position: | chr8:31197152-31196591 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 359 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 141, 119 |
| Conread position: | 94-637 |
| Cow position: | chr8:42000309-41999751 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 367 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 222, 18 |
| Conread position: | 94-638 |
| Cow position: | chr8:10347011-10346454 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 362 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 163, 227 |
| Conread position: | 95-768 |
| Cow position: | chr8:31624888-31625596 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 164 |
| Conread position: | 96-245 |
| Cow position: | chr8:6096995-6096848 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 96-249 |
| Cow position: | chr8:39576888-39577041 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 96-252 |
| Cow position: | chr8:53810058-53810213 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 40, 98 |
| Conread position: | 96-255 |
| Cow position: | chr8:5390060-5389898 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 96-255 |
| Cow position: | chr8:49529598-49529433 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 96-258 |
| Cow position: | chr8:20870380-20870218 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 96-264 |
| Cow position: | chr8:59544854-59544684 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 11, 30 |
| Conread position: | 97-253 |
| Cow position: | chr8:47274961-47274805 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 97-255 |
| Cow position: | chr8:4494132-4493974 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 99-255 |
| Cow position: | chr8:25269108-25269265 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 102-255 |
| Cow position: | chr8:5263483-5263331 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 102-255 |
| Cow position: | chr8:18551743-18551593 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 105-255 |
| Cow position: | chr8:11796144-11796292 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 111-264 |
| Cow position: | chr8:5663482-5663328 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 117-255 |
| Cow position: | chr8:37532144-37532282 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 145-417 |
| Cow position: | chr8:6013577-6013842 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 126, 99 |
| Conread position: | 395-632 |
| Cow position: | chr8:58635041-58634801 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 472-628 |
| Cow position: | chr8:5663103-5662946 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 81, 13 |
Show alignments to all cow chromosomes.