Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8026N16.3 |
| Conread position: | 425-665 |
| Cow position: | chr10:39482804-39483044 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 13, 30 |
| Conread position: | 428-665 |
| Cow position: | chr10:17963026-17963264 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 28, 60 |
| Conread position: | 429-664 |
| Cow position: | chr10:26812202-26812445 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 15, 61 |
| Conread position: | 431-665 |
| Cow position: | chr10:62626001-62625763 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 433-670 |
| Cow position: | chr10:11445127-11445372 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 52, 24 |
| Conread position: | 434-665 |
| Cow position: | chr10:18321982-18322213 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 42, 16 |
| Conread position: | 434-665 |
| Cow position: | chr10:19180447-19180672 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 152, 19 |
| Conread position: | 434-675 |
| Cow position: | chr10:32617540-32617783 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 49, 19 |
| Conread position: | 434-678 |
| Cow position: | chr10:6338800-6339049 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 38, 21 |
| Conread position: | 443-675 |
| Cow position: | chr10:39065864-39066091 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 182, 62 |
| Conread position: | 445-605 |
| Cow position: | chr10:45877555-45877392 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 93, 55 |
| Conread position: | 445-664 |
| Cow position: | chr10:2272704-2272482 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 87, 60 |
| Conread position: | 451-664 |
| Cow position: | chr10:67843599-67843808 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 118, 42 |
| Conread position: | 453-665 |
| Cow position: | chr10:62846539-62846757 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 38, 53 |
| Conread position: | 458-642 |
| Cow position: | chr10:5110487-5110679 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 86, 44 |
| Conread position: | 481-632 |
| Cow position: | chr10:52747930-52748090 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 67, 21 |
| Conread position: | 481-637 |
| Cow position: | chr10:8079457-8079293 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 60, 21 |
| Conread position: | 481-666 |
| Cow position: | chr10:33241629-33241820 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 67, 26 |
| Conread position: | 481-668 |
| Cow position: | chr10:9087424-9087616 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 76, 24 |
| Conread position: | 481-668 |
| Cow position: | chr10:39511412-39511598 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 67, 24 |
| Conread position: | 481-668 |
| Cow position: | chr10:46741915-46742105 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 51, 24 |
| Conread position: | 481-668 |
| Cow position: | chr10:55844196-55844005 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 67, 24 |
| Conread position: | 482-661 |
| Cow position: | chr10:27263037-27262851 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 66, 23 |
| Conread position: | 482-665 |
| Cow position: | chr10:28252170-28251986 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 83, 23 |
| Conread position: | 484-631 |
| Cow position: | chr10:28168199-28168350 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 48, 21 |
| Conread position: | 484-691 |
| Cow position: | chr10:13787742-13787527 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 64, 17 |
| Conread position: | 489-671 |
| Cow position: | chr10:36927196-36927376 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 57, 16 |
| Conread position: | 490-666 |
| Cow position: | chr10:804329-804509 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 105, 17 |
| Conread position: | 490-668 |
| Cow position: | chr10:17229820-17229636 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 58, 15 |
| Conread position: | 503-644 |
| Cow position: | chr10:31630783-31630635 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 45, 124 |
| Conread position: | 503-665 |
| Cow position: | chr10:47342352-47342521 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 46, 164 |
| Conread position: | 508-665 |
| Cow position: | chr10:49554125-49554286 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 58, 119 |
| Conread position: | 508-686 |
| Cow position: | chr10:26686352-26686171 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 42, 49 |
| Conread position: | 519-668 |
| Cow position: | chr10:33882213-33882065 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 29, 36 |
| Conread position: | 527-665 |
| Cow position: | chr10:9063585-9063726 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 17, 32 |
| Conread position: | 527-670 |
| Cow position: | chr10:2348757-2348614 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 22, 29 |
| Conread position: | 540-691 |
| Cow position: | chr10:46083945-46084103 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 26, 17 |
Show alignments to all cow chromosomes.