Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8026N16.3 |
| Conread position: | 434-665 |
| Cow position: | chr12:19215717-19215954 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 36, 18 |
| Conread position: | 435-609 |
| Cow position: | chr12:38503825-38503646 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 7, 74 |
| Conread position: | 442-649 |
| Cow position: | chr12:7163551-7163757 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 102, 11 |
| Conread position: | 445-625 |
| Cow position: | chr12:4180385-4180196 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 103, 60 |
| Conread position: | 445-665 |
| Cow position: | chr12:5602058-5602292 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 445-665 |
| Cow position: | chr12:26186556-26186773 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 96, 57 |
| Conread position: | 445-667 |
| Cow position: | chr12:9616554-9616332 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 152, 37 |
| Conread position: | 448-665 |
| Cow position: | chr12:2763906-2764123 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 71, 40 |
| Conread position: | 453-665 |
| Cow position: | chr12:42335712-42335916 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 122, 52 |
| Conread position: | 456-664 |
| Cow position: | chr12:9526287-9526076 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 85, 46 |
| Conread position: | 477-668 |
| Cow position: | chr12:21136356-21136151 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 5, 29 |
| Conread position: | 481-665 |
| Cow position: | chr12:29466249-29466442 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 60, 19 |
| Conread position: | 481-665 |
| Cow position: | chr12:36898936-36899121 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 71, 27 |
| Conread position: | 499-677 |
| Cow position: | chr12:31728105-31727931 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 33, 106 |
| Conread position: | 503-686 |
| Cow position: | chr12:26720847-26720670 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 44, 56 |
| Conread position: | 506-665 |
| Cow position: | chr12:33250150-33250317 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 42, 21 |
| Conread position: | 508-664 |
| Cow position: | chr12:40879833-40879989 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 97, 42 |
| Conread position: | 508-665 |
| Cow position: | chr12:6973601-6973763 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
Show alignments to all cow chromosomes.