Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8026N16.3 |
| Conread position: | 430-675 |
| Cow position: | chr13:34082498-34082265 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 46, 28 |
| Conread position: | 436-670 |
| Cow position: | chr13:11263144-11263380 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 48, 23 |
| Conread position: | 441-660 |
| Cow position: | chr13:15371955-15371739 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 35, 11 |
| Conread position: | 442-668 |
| Cow position: | chr13:26484882-26484649 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 108, 63 |
| Conread position: | 445-629 |
| Cow position: | chr13:12508073-12507893 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 38, 63 |
| Conread position: | 445-663 |
| Cow position: | chr13:6639776-6639996 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 107, 41 |
| Conread position: | 445-665 |
| Cow position: | chr13:42599207-42598983 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 93, 42 |
| Conread position: | 445-675 |
| Cow position: | chr13:55778619-55778391 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 125, 42 |
| Conread position: | 445-686 |
| Cow position: | chr13:5909255-5909487 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 86, 31 |
| Conread position: | 448-622 |
| Cow position: | chr13:57416079-57415909 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 34, 58 |
| Conread position: | 453-675 |
| Cow position: | chr13:16136253-16136480 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 35, 53 |
| Conread position: | 456-665 |
| Cow position: | chr13:25921513-25921310 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 76, 32 |
| Conread position: | 480-665 |
| Cow position: | chr13:1165698-1165509 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 70, 25 |
| Conread position: | 481-644 |
| Cow position: | chr13:49624012-49623844 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 61, 21 |
| Conread position: | 481-645 |
| Cow position: | chr13:3164960-3164799 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 137, 24 |
| Conread position: | 481-657 |
| Cow position: | chr13:46515546-46515373 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 103, 18 |
| Conread position: | 482-649 |
| Cow position: | chr13:505456-505277 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 66, 25 |
| Conread position: | 482-675 |
| Cow position: | chr13:42780524-42780331 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 52, 23 |
| Conread position: | 483-665 |
| Cow position: | chr13:50531996-50531804 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 484-675 |
| Cow position: | chr13:56916126-56916319 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 489-686 |
| Cow position: | chr13:55458922-55459119 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 55, 16 |
| Conread position: | 491-664 |
| Cow position: | chr13:15788560-15788725 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 56, 14 |
| Conread position: | 494-644 |
| Cow position: | chr13:32788605-32788454 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 54, 11 |
| Conread position: | 503-674 |
| Cow position: | chr13:21292439-21292264 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 41, 63 |
| Conread position: | 503-675 |
| Cow position: | chr13:14824947-14824768 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 508-665 |
| Cow position: | chr13:44586332-44586175 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 66, 43 |
| Conread position: | 508-670 |
| Cow position: | chr13:20296769-20296936 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 61, 50 |
| Conread position: | 567-665 |
| Cow position: | chr13:6187055-6186957 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 82 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.