Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8026N16.3 |
| Conread position: | 428-593 |
| Cow position: | chr17:42357175-42357003 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 37, 24 |
| Conread position: | 445-675 |
| Cow position: | chr17:27989670-27989440 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 177 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 158, 48 |
| Conread position: | 448-644 |
| Cow position: | chr17:4807991-4807791 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 96, 41 |
| Conread position: | 448-658 |
| Cow position: | chr17:17558147-17557933 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 156, 12 |
| Conread position: | 448-686 |
| Cow position: | chr17:33402124-33401877 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 80, 50 |
| Conread position: | 448-691 |
| Cow position: | chr17:17568809-17569054 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 164, 57 |
| Conread position: | 453-691 |
| Cow position: | chr17:6859442-6859690 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 93, 52 |
| Conread position: | 456-706 |
| Cow position: | chr17:34753387-34753644 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 85, 46 |
| Conread position: | 480-691 |
| Cow position: | chr17:5192908-5192702 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 70, 27 |
| Conread position: | 480-700 |
| Cow position: | chr17:40090871-40090643 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 54, 9 |
| Conread position: | 481-665 |
| Cow position: | chr17:30493130-30492948 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 143, 24 |
| Conread position: | 483-665 |
| Cow position: | chr17:20010111-20009925 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 65, 17 |
| Conread position: | 489-670 |
| Cow position: | chr17:18837937-18837750 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 43, 16 |
| Conread position: | 494-663 |
| Cow position: | chr17:6873527-6873352 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 54, 11 |
| Conread position: | 508-665 |
| Cow position: | chr17:13503101-13503267 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 33, 47 |
| Conread position: | 527-675 |
| Cow position: | chr17:20474725-20474879 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 17, 0 |
Show alignments to all cow chromosomes.