Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8026N16.3 |
| Conread position: | 423-644 |
| Cow position: | chr18:19304859-19304627 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 16, 32 |
| Conread position: | 426-620 |
| Cow position: | chr18:1579728-1579535 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 14, 30 |
| Conread position: | 431-668 |
| Cow position: | chr18:51555772-51555529 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 18, 72 |
| Conread position: | 432-668 |
| Cow position: | chr18:13354096-13353862 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 180, 40 |
| Conread position: | 434-686 |
| Cow position: | chr18:7661951-7661693 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 197 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 12, 20 |
| Conread position: | 437-668 |
| Cow position: | chr18:18792253-18792024 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 111, 15 |
| Conread position: | 445-662 |
| Cow position: | chr18:15860467-15860243 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 103, 62 |
| Conread position: | 445-663 |
| Cow position: | chr18:23724490-23724268 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 102, 57 |
| Conread position: | 445-665 |
| Cow position: | chr18:23382137-23382354 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 101, 41 |
| Conread position: | 445-665 |
| Cow position: | chr18:42562440-42562212 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 101, 60 |
| Conread position: | 445-666 |
| Cow position: | chr18:36882690-36882906 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 160, 62 |
| Conread position: | 445-667 |
| Cow position: | chr18:29657226-29657002 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 10, 26 |
| Conread position: | 445-684 |
| Cow position: | chr18:35461676-35461911 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 103, 60 |
| Conread position: | 448-692 |
| Cow position: | chr18:10636314-10636059 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 93, 57 |
| Conread position: | 453-668 |
| Cow position: | chr18:21248328-21248543 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 95, 28 |
| Conread position: | 459-675 |
| Cow position: | chr18:29611975-29611750 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 89, 19 |
| Conread position: | 470-688 |
| Cow position: | chr18:26510029-26509808 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 79, 35 |
| Conread position: | 477-679 |
| Cow position: | chr18:29784461-29784670 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 71, 28 |
| Conread position: | 482-665 |
| Cow position: | chr18:9138182-9137996 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 119, 20 |
| Conread position: | 490-688 |
| Cow position: | chr18:3995595-3995791 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 51, 17 |
| Conread position: | 503-665 |
| Cow position: | chr18:53284434-53284270 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 103, 54 |
| Conread position: | 508-665 |
| Cow position: | chr18:17765612-17765445 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 508-665 |
| Cow position: | chr18:17816093-17816254 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 97, 43 |
| Conread position: | 508-675 |
| Cow position: | chr18:41934817-41934987 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 101, 50 |
| Conread position: | 510-690 |
| Cow position: | chr18:16447304-16447492 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 40, 48 |
| Conread position: | 512-663 |
| Cow position: | chr18:14718325-14718472 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 36, 47 |
Show alignments to all cow chromosomes.